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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G076010.1
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1
HORVU7Hr1G003870.3
HORVU7Hr1G003880.2
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 HORVU1Hr1G076010.1 AT3G16310.1 21798944
AT1G75880.1 HORVU3Hr1G026980.2 AT3G16310.1 21798944
AT1G75880.1 HORVU3Hr1G071060.1 AT3G16310.1 21798944
AT1G75880.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
AT1G75880.1 HORVU7Hr1G003870.3 AT5G24290.1 21798944
AT1G75880.1 HORVU7Hr1G003880.2 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G002800.1 Wheat mitochondrion 88.57 83.37
TraesCS6B01G007700.1 Wheat plastid 83.12 76.56
TraesCS6A01G002700.1 Wheat mitochondrion 89.35 73.35
Os02t0101400-01 Rice cytosol 49.61 67.73
GSMUA_Achr4P25550_001 Banana extracellular, golgi, vacuole 50.65 53.72
Zm00001d014918_P001 Maize mitochondrion 62.86 51.05
Solyc04g081760.2.1 Tomato extracellular 33.77 49.06
PGSC0003DMT400025568 Potato extracellular 43.64 48.0
Solyc04g081770.2.1 Tomato cytosol 42.34 47.8
VIT_18s0001g14760.t01 Wine grape extracellular 34.55 47.67
PGSC0003DMT400025569 Potato extracellular 43.38 47.31
OQU84135 Sorghum plasma membrane 63.64 46.93
KRH17463 Soybean endoplasmic reticulum, golgi 44.16 46.83
KRH51682 Soybean extracellular, golgi 44.16 46.7
CDY42062 Canola cytosol 34.55 46.18
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 42.86 45.96
VIT_18s0001g14810.t01 Wine grape cytosol 41.3 45.95
Solyc06g048670.2.1 Tomato extracellular 42.08 45.89
KRH05980 Soybean endoplasmic reticulum, golgi 43.12 45.73
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 43.12 45.6
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 43.12 45.6
CDX68113 Canola endoplasmic reticulum, plasma membrane 42.86 45.58
CDX73211 Canola extracellular 42.86 45.58
CDY65553 Canola extracellular 38.96 45.45
Bra003736.1-P Field mustard extracellular, plasma membrane 42.6 45.3
Bra015802.1-P Field mustard extracellular 42.6 45.3
CDX85929 Canola endoplasmic reticulum, plasma membrane 42.6 45.3
CDX87651 Canola extracellular 42.6 45.3
CDY51993 Canola plasma membrane 37.4 45.14
CDY48852 Canola extracellular 38.18 45.09
KRH08025 Soybean extracellular, vacuole 42.86 45.08
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 42.6 45.05
Bra027858.1-P Field mustard extracellular 40.78 44.99
Solyc12g089350.1.1 Tomato extracellular, golgi 40.26 44.93
VIT_18s0001g14780.t01 Wine grape plasma membrane 38.96 44.64
Solyc04g081790.2.1 Tomato extracellular, plasma membrane 40.52 44.57
KRH28831 Soybean plasma membrane 42.34 44.54
CDY36116 Canola extracellular, plasma membrane 36.88 44.51
CDX87653 Canola cytosol 35.32 44.44
Bra027859.1-P Field mustard extracellular 40.26 44.41
CDY20086 Canola extracellular, plasma membrane 40.26 44.41
HORVU2Hr1G107400.3 Barley mitochondrion 25.71 44.39
PGSC0003DMT400070969 Potato extracellular 24.68 44.39
AT3G14820.1 Thale cress extracellular, plasma membrane 40.26 44.16
CDY32339 Canola extracellular, plasma membrane 40.26 44.16
Bra015804.1-P Field mustard cytosol 35.06 44.12
KRH69753 Soybean extracellular, plasma membrane, vacuole 41.82 44.11
CDY64565 Canola extracellular 36.62 44.06
CDY41727 Canola extracellular 37.14 43.87
AT3G43550.1 Thale cress extracellular 32.73 43.75
CDY09420 Canola extracellular 36.36 43.75
PGSC0003DMT400075642 Potato extracellular 40.78 43.61
CDY53577 Canola extracellular 36.88 43.56
Bra026636.1-P Field mustard extracellular 39.48 43.55
Bra010987.1-P Field mustard plasma membrane 39.22 43.39
KRH17460 Soybean nucleus 40.78 43.37
Bra015803.1-P Field mustard cytosol 38.96 43.35
CDY41728 Canola extracellular 36.62 43.25
AT5G42170.1 Thale cress extracellular 41.3 43.09
KRH55990 Soybean extracellular, plasma membrane, vacuole 40.78 43.01
HORVU1Hr1G036440.1 Barley endoplasmic reticulum, extracellular, plastid 41.56 43.01
AT1G58525.1 Thale cress extracellular 38.18 42.98
KRH55993 Soybean extracellular 40.26 42.82
AT3G43570.1 Thale cress extracellular 35.58 42.81
AT1G58725.1 Thale cress extracellular 38.7 42.69
AT1G59030.1 Thale cress extracellular, plasma membrane 38.7 42.69
AT1G59406.1 Thale cress extracellular 38.7 42.69
Bra027951.1-P Field mustard extracellular 38.7 42.69
CDY53576 Canola extracellular 36.88 42.39
KRH55991 Soybean extracellular 39.74 42.27
CDY71031 Canola cytosol 10.91 42.0
KRH17462 Soybean extracellular, plasma membrane, plastid 40.0 41.96
KRH51683 Soybean plasma membrane 31.17 41.96
CDX87652 Canola golgi, plasma membrane 39.48 41.87
KRH17461 Soybean nucleus 40.0 41.85
HORVU5Hr1G125000.1 Barley vacuole 40.26 41.78
Bra035295.1-P Field mustard mitochondrion 31.17 41.67
KRH61019 Soybean extracellular, plasma membrane 38.44 41.46
Bra027950.1-P Field mustard extracellular 37.66 41.43
Solyc04g081780.2.1 Tomato extracellular 36.88 41.4
KRH05976 Soybean nucleus 40.0 41.4
CDX85928 Canola plasma membrane 40.0 41.18
CDY70534 Canola plasma membrane 40.0 41.18
CDY53562 Canola extracellular 26.49 41.13
Solyc04g081800.1.1 Tomato extracellular, plasma membrane 37.92 40.78
CDX73210 Canola golgi, mitochondrion, plasma membrane 38.96 40.65
KRH05977 Soybean nucleus 39.22 40.59
Bra003737.1-P Field mustard cytosol, plastid 33.77 40.37
KRH51681 Soybean extracellular, plasma membrane 37.4 40.34
KRH05978 Soybean plastid 39.48 40.32
HORVU7Hr1G083440.4 Barley extracellular 37.14 40.28
HORVU7Hr1G083530.2 Barley golgi 39.48 40.11
AT1G75880.1 Thale cress golgi, plasma membrane 38.96 40.0
CDY02386 Canola golgi 40.52 39.8
AT1G20120.1 Thale cress plasma membrane 41.3 39.55
KRH69760 Soybean extracellular 37.14 39.5
HORVU0Hr1G012230.2 Barley extracellular, vacuole 35.84 39.09
CDY44206 Canola plasma membrane 38.18 38.48
CDY69331 Canola cytosol 25.71 38.37
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 41.56 38.19
CDY57591 Canola endoplasmic reticulum, plasma membrane 41.56 38.19
HORVU5Hr1G124980.2 Barley plastid 40.52 38.14
AT1G75890.3 Thale cress plastid 38.7 37.72
HORVU2Hr1G068430.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane 36.88 37.57
HORVU0Hr1G012390.2 Barley extracellular, vacuole 34.81 37.22
HORVU5Hr1G049650.2 Barley extracellular, vacuole 34.81 37.22
KRH08023 Soybean extracellular 28.05 36.99
Bra016475.1-P Field mustard plastid 35.84 36.41
AT1G20132.1 Thale cress extracellular, vacuole 35.84 36.03
HORVU6Hr1G018750.1 Barley endoplasmic reticulum, plasma membrane 35.84 35.48
HORVU7Hr1G092040.2 Barley golgi 33.25 34.69
HORVU6Hr1G035230.1 Barley extracellular, golgi, mitochondrion 32.73 34.43
CDY54336 Canola extracellular, golgi, plasma membrane 26.23 33.01
HORVU3Hr1G087670.3 Barley extracellular 31.43 32.97
HORVU1Hr1G070790.1 Barley extracellular, plastid 31.95 32.2
HORVU3Hr1G088120.3 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 31.17 31.75
HORVU7Hr1G000470.1 Barley cytosol 32.21 29.67
HORVU6Hr1G035210.2 Barley cytosol, peroxisome 30.91 29.46
CDY12974 Canola golgi, mitochondrion 39.74 28.28
HORVU3Hr1G001200.2 Barley mitochondrion 29.87 27.91
CDY71376 Canola plastid 33.77 26.53
VIT_18s0001g14770.t01 Wine grape plastid 42.34 25.96
AT1G20130.1 Thale cress mitochondrion 35.06 25.28
HORVU0Hr1G014960.1 Barley cytosol, mitochondrion 29.87 24.84
CDY44205 Canola plasma membrane 32.21 22.46
PGSC0003DMT400025571 Potato cytosol, plasma membrane, plastid 36.1 19.74
Bra012212.1-P Field mustard plastid 32.73 15.93
CDY29371 Canola plasma membrane 35.06 15.52
Bra025794.1-P Field mustard plasma membrane 35.06 15.17
CDY67439 Canola plasma membrane 34.29 14.72
Protein Annotations
EnsemblPlants:HORVU6Hr1G001510.1EnsemblPlantsGene:HORVU6Hr1G001510Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF182PFAM:PF00657SEG:segSignalP:SignalP-noTMSUPFAM:SSF52266TMHMM:TMhelix
UniParc:UPI0002950720UniProt:M0W5G9MapMan:35.1:::
Description
No Description!
Coordinates
chrchr6H:+:4815552..4817209
Molecular Weight (calculated)
40672.9 Da
IEP (calculated)
7.803
GRAVY (calculated)
0.094
Length
385 amino acids
Sequence
(BLAST)
001: MEAKSSAALI SLVLLLAVAT GGVSGRTTYT GSSSAGTTGK KQVGHGNGVK PTPQTKKVPA LVVFGDSIVD PGNNNDIHTI IKANFPPYGH DFGADHRPTG
101: RFCNGRIPTD FIASKLGLKY LLPAYLQQSP NLTAHDLLTG VSFASGGTGY DPLTAQLASV ISMTDQLRMF HDYKAKVRAL AGDAALSEIL SKGVFAVCAG
201: SDDVANTYFT MRARSSYSHA DYASLIVSHA SAFLNGLLAA GARRVAIISM PPIGCVPSQR TLSGGMARGC SSGHNEIAEM INAGMGTAVE SLKARHPGAK
301: VVLMDIYGFL MDMMLRPQGY GFKESTLGCC GTGMMEVSVL CNGVTSAVCG HVADYLFWDS YHPTEKAYGI LVDFVYDNYL KELID
Best Arabidopsis Sequence Match ( AT1G75900.1 )
(BLAST)
001: MKDNSSWSCS CSWSSWKICL LSVLFLTETI TAVKLPPKLI IPAVIAFGDS IVDTGMNNNV KTVVKCDFLP YGINFQSGVA TGRFCDGRVP ADLLAEELGI
101: KSIVPAYLDP NLKSKDLLTG VSFASGGSGY DPITPKLVAV ISLEDQLSYF EEYIEKVKNI VGEARKDFIV ANSLFLLVAG SDDIANTYYT LRARPEYDVD
201: SYTTLMSDSA SEFVTKLYGY GVRRVAVFGA PPIGCVPSQR TLGGGILRDC ADNYNEAAKL FNSKLSPKLD SLRKTLPGIK PIYINIYDPL FDIIQNPANY
301: GFEVSNKGCC GTGAIEVAVL CNKITSSVCP DVSTHVFWDS YHPTEKTYKV LVSLLINKFV NQFV
Arabidopsis Description
EXL3GDSL esterase/lipase EXL3 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH6]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.