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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, endoplasmic reticulum, mitochondrion

Predictor Summary:
  • mitochondrion 2
  • endoplasmic reticulum 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, mitochondrion, plasma membrane
Any Predictor:endoplasmic reticulum, mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
TargetP:mitochondrion
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G076010.1
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1
HORVU7Hr1G003870.3
HORVU7Hr1G003880.2
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 HORVU1Hr1G076010.1 AT3G16310.1 21798944
AT1G75880.1 HORVU3Hr1G026980.2 AT3G16310.1 21798944
AT1G75880.1 HORVU3Hr1G071060.1 AT3G16310.1 21798944
AT1G75880.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
AT1G75880.1 HORVU7Hr1G003870.3 AT5G24290.1 21798944
AT1G75880.1 HORVU7Hr1G003880.2 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G278500.1 Wheat plasma membrane, vacuole 82.8 89.17
TraesCS2B01G297300.1 Wheat plasma membrane 82.01 88.32
HORVU6Hr1G018750.1 Barley endoplasmic reticulum, plasma membrane 62.7 60.93
Os10t0140300-01 Rice plasma membrane 55.03 59.6
GSMUA_Achr4P25720_001 Banana vacuole 41.01 42.82
VIT_18s0001g14810.t01 Wine grape cytosol 37.83 41.33
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 39.15 41.23
VIT_18s0001g14760.t01 Wine grape extracellular 30.42 41.22
CDY42062 Canola cytosol 30.69 40.28
KRH17463 Soybean endoplasmic reticulum, golgi 38.62 40.22
KRH05980 Soybean endoplasmic reticulum, golgi 38.36 39.94
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 38.36 39.84
PGSC0003DMT400025568 Potato extracellular 36.51 39.43
Solyc04g081770.2.1 Tomato cytosol 35.45 39.3
CDY20086 Canola extracellular, plasma membrane 36.24 39.26
KRH55993 Soybean extracellular 37.57 39.23
CDY51993 Canola plasma membrane 33.07 39.19
CDY36116 Canola extracellular, plasma membrane 32.8 38.87
PGSC0003DMT400025569 Potato extracellular 36.24 38.81
KRH28831 Soybean plasma membrane 37.57 38.8
AT3G14820.1 Thale cress extracellular, plasma membrane 35.98 38.75
CDY32339 Canola extracellular, plasma membrane 35.98 38.75
Bra003736.1-P Field mustard extracellular, plasma membrane 37.04 38.67
CDX68113 Canola endoplasmic reticulum, plasma membrane 37.04 38.67
Solyc12g089350.1.1 Tomato extracellular, golgi 35.19 38.55
CDY65553 Canola extracellular 33.6 38.48
AT3G43570.1 Thale cress extracellular 32.54 38.44
KRH17462 Soybean extracellular, plasma membrane, plastid 37.3 38.42
CDX85929 Canola endoplasmic reticulum, plasma membrane 36.77 38.4
CDY48852 Canola extracellular 33.07 38.34
CDX87653 Canola cytosol 30.95 38.24
KRH51682 Soybean extracellular, golgi 36.77 38.19
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 36.77 38.19
CDY64565 Canola extracellular 32.28 38.12
Bra015802.1-P Field mustard extracellular 36.51 38.12
CDX87651 Canola extracellular 36.51 38.12
KRH55991 Soybean extracellular 36.51 38.12
Bra027858.1-P Field mustard extracellular 35.19 38.11
PGSC0003DMT400075642 Potato extracellular 36.24 38.06
Solyc04g081790.2.1 Tomato extracellular, plasma membrane 35.19 38.0
Bra010987.1-P Field mustard plasma membrane 34.92 37.93
Bra015804.1-P Field mustard cytosol 30.69 37.91
CDX73211 Canola extracellular 36.24 37.85
AT1G58725.1 Thale cress extracellular 34.92 37.82
AT1G59030.1 Thale cress extracellular, plasma membrane 34.92 37.82
AT1G59406.1 Thale cress extracellular 34.92 37.82
CDY09420 Canola extracellular 32.01 37.81
KRH55990 Soybean extracellular, plasma membrane, vacuole 36.51 37.81
CDY41727 Canola extracellular 32.54 37.73
AT1G58525.1 Thale cress extracellular 34.13 37.72
HORVU1Hr1G036440.1 Barley endoplasmic reticulum, extracellular, plastid 37.04 37.63
Bra027859.1-P Field mustard extracellular 34.66 37.54
HORVU7Hr1G083440.4 Barley extracellular 35.19 37.46
Solyc06g048670.2.1 Tomato extracellular 34.92 37.39
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 35.98 37.36
Solyc04g081760.2.1 Tomato extracellular 26.19 37.36
KRH61019 Soybean extracellular, plasma membrane 35.19 37.25
Bra026636.1-P Field mustard extracellular 34.39 37.25
KRH05978 Soybean plastid 37.04 37.14
CDY53577 Canola extracellular 32.01 37.12
KRH69760 Soybean extracellular 35.45 37.02
KRH69753 Soybean extracellular, plasma membrane, vacuole 35.71 36.99
KRH17461 Soybean nucleus 35.98 36.96
KRH08025 Soybean extracellular, vacuole 35.71 36.89
HORVU6Hr1G001510.1 Barley endoplasmic reticulum, vacuole 37.57 36.88
CDY41728 Canola extracellular 31.75 36.81
KRH51681 Soybean extracellular, plasma membrane 34.66 36.69
AT5G42170.1 Thale cress extracellular 35.71 36.59
AT3G43550.1 Thale cress extracellular 27.78 36.46
Bra035295.1-P Field mustard mitochondrion 27.78 36.46
Solyc04g081780.2.1 Tomato extracellular 33.07 36.44
CDY53576 Canola extracellular 32.28 36.42
HORVU7Hr1G083530.2 Barley golgi 36.51 36.41
VIT_18s0001g14780.t01 Wine grape plasma membrane 32.28 36.31
KRH05977 Soybean nucleus 35.71 36.29
Bra015803.1-P Field mustard cytosol 33.07 36.13
Bra027950.1-P Field mustard extracellular 33.33 36.0
Bra027951.1-P Field mustard extracellular 33.07 35.82
Solyc04g081800.1.1 Tomato extracellular, plasma membrane 33.86 35.75
CDY02386 Canola golgi 36.77 35.46
KRH51683 Soybean plasma membrane 26.72 35.31
PGSC0003DMT400070969 Potato extracellular 19.84 35.05
CDX87652 Canola golgi, plasma membrane 33.33 34.71
CDY53562 Canola extracellular 22.75 34.68
KRH17460 Soybean nucleus 33.07 34.53
AT1G75880.1 Thale cress golgi, plasma membrane 34.13 34.4
AT1G20132.1 Thale cress extracellular, vacuole 34.66 34.2
HORVU0Hr1G012390.2 Barley extracellular, vacuole 32.54 34.17
HORVU5Hr1G049650.2 Barley extracellular, vacuole 32.54 34.17
Bra003737.1-P Field mustard cytosol, plastid 29.1 34.16
CDY44206 Canola plasma membrane 34.39 34.03
CDX85928 Canola plasma membrane 33.6 33.96
CDY70534 Canola plasma membrane 33.6 33.96
CDX73210 Canola golgi, mitochondrion, plasma membrane 33.07 33.88
KRH05976 Soybean nucleus 33.33 33.87
HORVU0Hr1G012230.2 Barley extracellular, vacuole 31.48 33.71
HORVU5Hr1G125000.1 Barley vacuole 33.07 33.69
HORVU2Hr1G107400.3 Barley mitochondrion 19.84 33.63
AT1G20120.1 Thale cress plasma membrane 35.71 33.58
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 36.77 33.17
CDY57591 Canola endoplasmic reticulum, plasma membrane 36.77 33.17
Zm00001d014308_P001 Maize endoplasmic reticulum 57.14 33.08
HORVU3Hr1G087670.3 Barley extracellular 32.01 32.97
CDY69331 Canola cytosol 22.49 32.95
AT1G75890.3 Thale cress plastid 34.13 32.66
HORVU6Hr1G035230.1 Barley extracellular, golgi, mitochondrion 31.48 32.51
KRH08023 Soybean extracellular 24.87 32.19
Bra016475.1-P Field mustard plastid 32.28 32.19
HORVU1Hr1G070790.1 Barley extracellular, plastid 32.01 31.68
HORVU7Hr1G092040.2 Barley golgi 30.16 30.89
HORVU5Hr1G124980.2 Barley plastid 33.33 30.81
CDY71031 Canola cytosol 7.94 30.0
HORVU3Hr1G088120.3 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 29.63 29.63
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 57.67 28.99
CDY54336 Canola extracellular, golgi, plasma membrane 21.96 27.12
HORVU7Hr1G000470.1 Barley cytosol 29.63 26.79
HORVU6Hr1G035210.2 Barley cytosol, peroxisome 28.57 26.73
HORVU3Hr1G001200.2 Barley mitochondrion 28.31 25.97
CDY12974 Canola golgi, mitochondrion 36.24 25.32
CDY71376 Canola plastid 32.8 25.31
AT1G20130.1 Thale cress mitochondrion 34.92 24.72
CDY44205 Canola plasma membrane 33.07 22.64
HORVU0Hr1G014960.1 Barley cytosol, mitochondrion 27.51 22.46
VIT_18s0001g14770.t01 Wine grape plastid 35.71 21.5
PGSC0003DMT400025571 Potato cytosol, plasma membrane, plastid 31.48 16.9
Bra012212.1-P Field mustard plastid 32.28 15.42
CDY29371 Canola plasma membrane 34.92 15.17
Bra025794.1-P Field mustard plasma membrane 34.92 14.83
CDY67439 Canola plasma membrane 33.6 14.16
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1UniProt:A0A287IBA2InterPro:GDSLGO:GO:0003674GO:GO:0003824
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0016298GO:GO:0016787GO:GO:0016788
EnsemblPlantsGene:HORVU2Hr1G068430EnsemblPlants:HORVU2Hr1G068430.1InterPro:IPR036514InterPro:Lipase_GDSL_ASPFAM:PF00657ScanProsite:PS01098
PANTHER:PTHR22835PANTHER:PTHR22835:SF217InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeSUPFAM:SSF52266SignalP:SignalP-TM
TMHMM:TMhelixUniParc:UPI000B4844E2SEG:seg:::
Description
No Description!
Coordinates
chrchr2H:-:481302728..481304407
Molecular Weight (calculated)
41054.1 Da
IEP (calculated)
9.345
GRAVY (calculated)
0.097
Length
378 amino acids
Sequence
(BLAST)
001: HTIVAKSERP RFKAFTTMYT MISALLVLAG VISGVRAAVP PPVPVPVPVP VGPPKGPTPP PAAAAGPIKY PALLAFGDSI IDTGNNNYIR TIVRANFPPY
101: GRDFPGHKAT GRFSDGRISV DFLAAALGVK ENLPPYLRKD LTLDELKTGV SFASAGSGYD NATCRTMSAL TMEQQLKMFL EYKAKVGTIP DKALYLMVWG
201: SNDVIEHFTF GDPMSVEQYS DLMAQRAISF IQSLVSLGAK TIAVTGAPPV GCVPSQRILA GGIRRQCSPD RNQLALMFNN KVKQRMAALG PKLPGVKLIF
301: IDLYAIFEDV IQRHEALGFK NAKDSCCGFV GLAVAVLCNF ASPVCAEPDK YIFWDSYHPS TSAYKVIMDM VVEKYFKY
Best Arabidopsis Sequence Match ( AT1G20120.1 )
(BLAST)
001: MLQDRVSGSL SSSKISRCVL FLSLFCFFLL TMHASANRLQ RVPNPGPSPA PEPKPCPSPG PNPAPATTKR THNTTFPAIF AFGDSILDTG NNDYILTLIK
101: ANFLPYGMNF PDKVPTGRFC NGKIPSDFIA DYIGVKPVVP AYLRPGLTQE DLLTGVSFAS GGSGYDPLTP IVVSAIPMSK QLTYFQEYIE KVKGFVGKEK
201: AEHIISKGLA IVVAGSDDLA NTYYGEHLEE FLYDIDTYTS FMASSAASFA MQLYESGAKK IGFIGVSPIG CIPIQRTTRG GLKRKCADEL NFAAQLFNSK
301: LSTSLNELAK TMKNTTLVYI DIYSSFNDMI QNPKKYGFDE IDRGCCGTGL LELGPLCNKY TSLLCKNVSS FMFWDSYHPT ERAYKILSQK FVENDMGPFY
401: DN
Arabidopsis Description
GDSL esterase/lipase At1g20120 [Source:UniProtKB/Swiss-Prot;Acc:P0DKJ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.