CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1
extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14825	Soybean	nucleus	96.37	96.37
KRH17906	Soybean	endoplasmic reticulum, extracellular	71.23	73.07
AT2G04570.1	Thale cress	extracellular	60.89	62.29
CDY15057	Canola	extracellular	60.89	61.93
Bra013200.1-P	Field mustard	extracellular	60.61	61.65
CDX93056	Canola	extracellular	60.61	61.65
KRH46013	Soybean	extracellular	58.1	59.43
KRH73314	Soybean	endoplasmic reticulum, extracellular	57.82	59.14
KRG98969	Soybean	extracellular	58.38	59.04
KRH14826	Soybean	endoplasmic reticulum, extracellular	56.98	58.96
GSMUA_Achr4P09470_001	Banana	extracellular	53.07	54.6
GSMUA_Achr7P05490_001	Banana	endoplasmic reticulum, extracellular	52.51	53.41
GSMUA_Achr2P05280_001	Banana	extracellular	46.93	53.0
GSMUA_Achr4P09480_001	Banana	endoplasmic reticulum, golgi	51.4	52.57
GSMUA_Achr3P13030_001	Banana	endoplasmic reticulum, golgi	50.28	50.99
Os09t0132900-02	Rice	extracellular	49.72	50.57
TraesCS6A01G172800.1	Wheat	extracellular, vacuole	47.21	49.56
Os02t0189300-01	Rice	endoplasmic reticulum, extracellular	50.28	49.45
HORVU5Hr1G049650.2	Barley	extracellular, vacuole	49.72	49.44
HORVU0Hr1G012390.2	Barley	extracellular, vacuole	49.72	49.44
TraesCS5A01G164200.1	Wheat	extracellular	48.88	49.02
Zm00001d019855_P001	Maize	extracellular, golgi	48.04	48.86
TraesCS6B01G200400.1	Wheat	extracellular, plastid	46.93	48.84
EES16382	Sorghum	extracellular, golgi	49.72	48.77
TraesCS3A01G007800.1	Wheat	endoplasmic reticulum, extracellular	47.77	48.58
TraesCS5D01G169100.1	Wheat	extracellular, golgi	48.32	48.32
TraesCSU01G210200.1	Wheat	extracellular	47.49	48.3
TraesCSU01G186900.1	Wheat	extracellular	47.49	48.3
Zm00001d015637_P001	Maize	extracellular	48.32	48.19
TraesCS5B01G161700.1	Wheat	golgi	48.04	47.91
TraesCSU01G187000.1	Wheat	extracellular	45.81	47.54
TraesCS3D01G002900.1	Wheat	plastid	47.21	47.21
OQU84537	Sorghum	endoplasmic reticulum, extracellular	46.93	47.19
TraesCS6D01G161900.1	Wheat	endoplasmic reticulum	47.49	47.09
HORVU6Hr1G035230.1	Barley	extracellular, golgi, mitochondrion	47.77	46.72
Zm00001d015636_P001	Maize	extracellular	46.93	46.54
TraesCS7D01G384600.1	Wheat	endoplasmic reticulum, extracellular, golgi	46.93	46.15
TraesCS6A01G172900.1	Wheat	extracellular, golgi	46.09	46.09
TraesCS7B01G290600.1	Wheat	golgi	46.93	45.9
TraesCS6B01G200500.1	Wheat	extracellular, golgi	45.53	45.79
TraesCS7A01G388700.1	Wheat	extracellular	46.65	45.75
OQU76903	Sorghum	plastid	46.37	45.73
Zm00001d014487_P001	Maize	plastid	46.37	45.6
TraesCS6D01G162000.3	Wheat	extracellular, vacuole	45.25	45.51
TraesCS5A01G164000.1	Wheat	extracellular, vacuole	44.97	45.48
Os02t0189200-01	Rice	extracellular	47.77	45.36
Os09t0247600-01	Rice	extracellular, golgi	44.97	45.22
EER96404	Sorghum	extracellular, vacuole	45.81	45.18
EER90082	Sorghum	golgi	46.37	45.11
HORVU0Hr1G012230.2	Barley	extracellular, vacuole	44.41	45.04
Os06t0636700-01	Rice	extracellular	48.04	45.03
HORVU7Hr1G092040.2	Barley	golgi	46.37	44.99
TraesCS5D01G169000.1	Wheat	extracellular	44.41	44.92
Os09t0132200-01	Rice	extracellular	43.85	44.73
TraesCS5B01G161500.1	Wheat	extracellular	44.13	44.63
Zm00001d036770_P001	Maize	mitochondrion	46.37	44.62
Zm00001d000061_P001	Maize	extracellular, golgi	43.58	44.44
Zm00001d053252_P001	Maize	extracellular, golgi, mitochondrion	42.46	43.93
EES04670	Sorghum	extracellular	46.09	43.77
EER94394	Sorghum	extracellular	43.58	43.7
TraesCS5D01G171800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.13	43.53
Zm00001d046642_P001	Maize	extracellular, golgi	47.21	43.44
TraesCS5B01G164400.1	Wheat	endoplasmic reticulum, vacuole	44.13	43.41
TraesCS5A01G167400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.85	43.13
HORVU6Hr1G035210.2	Barley	cytosol, peroxisome	48.04	42.57
HORVU3Hr1G001200.2	Barley	mitochondrion	44.69	38.84
KRH17460	Soybean	nucleus	38.27	37.85
KRH17461	Soybean	nucleus	38.83	37.77
KRH61019	Soybean	extracellular, plasma membrane	37.43	37.53
KRH55990	Soybean	extracellular, plasma membrane, vacuole	38.27	37.53
KRH05980	Soybean	endoplasmic reticulum, golgi	37.99	37.47
KRH28831	Soybean	plasma membrane	38.27	37.43
KRH05977	Soybean	nucleus	38.83	37.37
KRH72763	Soybean	extracellular	37.99	37.36
KRH17463	Soybean	endoplasmic reticulum, golgi	37.71	37.19
KRH05976	Soybean	nucleus	38.27	36.83
KRH10966	Soybean	extracellular	36.59	36.8
KRH55993	Soybean	extracellular	37.15	36.74
KXG26546	Sorghum	mitochondrion, plastid	45.81	36.53
KRH55991	Soybean	extracellular	36.87	36.46
KRH51681	Soybean	extracellular, plasma membrane	36.31	36.41
KRH51682	Soybean	extracellular, golgi	36.87	36.26
KRH61020	Soybean	endoplasmic reticulum, golgi, plastid	36.87	36.26
KRH20355	Soybean	extracellular, plasma membrane	37.15	36.04
KRH05978	Soybean	plastid	37.43	35.54
KRH21335	Soybean	extracellular, golgi	36.03	35.54
KRH73274	Soybean	extracellular	35.47	35.38
KRH69760	Soybean	extracellular	35.75	35.36
KRH50140	Soybean	extracellular, golgi, plasma membrane	36.31	35.33
KRH21336	Soybean	extracellular	36.03	35.25
KRH17462	Soybean	extracellular, plasma membrane, plastid	36.03	35.15
KRH72761	Soybean	extracellular	34.64	34.83
KRH10964	Soybean	endoplasmic reticulum, plasma membrane	35.47	34.7
KRH08023	Soybean	extracellular	27.93	34.25
KRH69753	Soybean	extracellular, plasma membrane, vacuole	34.36	33.7
KRH08025	Soybean	extracellular, vacuole	33.8	33.06
KRH51683	Soybean	plasma membrane	26.26	32.87

Protein Annotations

EMBL:ACUP02001273	EnsemblPlants:KRH73315	EnsemblPlantsGene:GLYMA_02G266700	EntrezGene:100809796	Gene3D:3.40.50.1110	GO:GO:0003674
GO:GO:0003824	GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835	PANTHER:PTHR22835:SF229	PFAM:PF00657	ProteinID:KRH73315	ProteinID:KRH73315.1
SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0002336E35	UniProt:I1JIH2	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr2:+:45131059..45134696

Molecular Weight (calculated)

39633.6 Da

IEP (calculated)

8.342

GRAVY (calculated)

-0.048

Length

358 amino acids

Sequence
(BLAST)

001: MEKGQRKTTP LLLCSHIVVL HLLSLVAETS AKVSAVIVFG DSSVDAGNNN FIPTIARSNF QPYGRDFEGG KATGRFCNGR IPTDFISESF GLKPYVPAYL
101: DPKYNISDFA SGVTFASAAT GYDNATSDVL SVIPLWKQLE YYKGYQKNLS AYLGESKAKD TIAEALHLMS LGTNDFLENY YTMPGRASQF TPQQYQNFLA
201: GIAENFIRSL YGLGARKVSL GGLPPMGCLP LERTTSIAGG NDCVARYNNI ALEFNNRLKN LTIKLNQELP GLKLVFSNPY YIMLSIIKRP QLYGFESTSV
301: ACCATGMFEM GYACSRGQMF SCTDASKYVF WDSFHPTEMT NSIVAKYVVL RVLYQFLQ

Best Arabidopsis Sequence Match ( AT2G04570.1 )
(BLAST)

001: MGHLKSLFTI LFLIAMSSTV TFAGKIPAII VFGDSSVDAG NNNYIPTVAR SNFEPYGRDF VGGKPTGRFC NGKIATDFMS EALGLKPIIP AYLDPSYNIS
101: DFATGVTFAS AATGYDNATS DVLSVLPLWK QLEYYKEYQT KLKAYQGKDR GTETIESSLY LISIGTNDFL ENYFAFPGRS SQYSVSLYQD FLAGIAKEFV
201: KKLHGLGARK ISLGGLPPMG CMPLERATNI GTGGECVGRY NDIAVQFNSK LDKMVEKLSK ELPGSNLVFS NPYEPFMRII KNPSSFGFEV VGAACCATGM
301: FEMGYGCQRN NPFTCTNADK YVFWDSFHPT QKTNHIMANA LMNSTFPHFL

Arabidopsis Description

GDSL esterase/lipase At2g04570 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJB4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.