CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1
extracellular 7
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73315	Soybean	nucleus	96.37	96.37
KRH17906	Soybean	endoplasmic reticulum, extracellular	72.91	74.79
AT2G04570.1	Thale cress	extracellular	62.01	63.43
Bra013200.1-P	Field mustard	extracellular	61.73	62.78
CDX93056	Canola	extracellular	61.73	62.78
CDY15057	Canola	extracellular	61.45	62.5
KRH46013	Soybean	extracellular	58.94	60.29
KRG98969	Soybean	extracellular	59.22	59.89
KRH14826	Soybean	endoplasmic reticulum, extracellular	57.54	59.54
KRH73314	Soybean	endoplasmic reticulum, extracellular	58.1	59.43
GSMUA_Achr4P09470_001	Banana	extracellular	53.63	55.17
GSMUA_Achr7P05490_001	Banana	endoplasmic reticulum, extracellular	53.35	54.26
GSMUA_Achr2P05280_001	Banana	extracellular	47.21	53.31
GSMUA_Achr4P09480_001	Banana	endoplasmic reticulum, golgi	51.4	52.57
GSMUA_Achr3P13030_001	Banana	endoplasmic reticulum, golgi	51.12	51.84
Os09t0132900-02	Rice	extracellular	50.56	51.42
TraesCS6A01G172800.1	Wheat	extracellular, vacuole	48.04	50.44
HORVU0Hr1G012390.2	Barley	extracellular, vacuole	50.56	50.28
HORVU5Hr1G049650.2	Barley	extracellular, vacuole	50.56	50.28
Zm00001d019855_P001	Maize	extracellular, golgi	49.16	50.0
Os02t0189300-01	Rice	endoplasmic reticulum, extracellular	50.84	50.0
TraesCS5A01G164200.1	Wheat	extracellular	49.72	49.86
TraesCS6B01G200400.1	Wheat	extracellular, plastid	47.77	49.71
EES16382	Sorghum	extracellular, golgi	50.56	49.59
TraesCS5D01G169100.1	Wheat	extracellular, golgi	49.16	49.16
TraesCSU01G186900.1	Wheat	extracellular	48.32	49.15
TraesCS3A01G007800.1	Wheat	endoplasmic reticulum, extracellular	48.32	49.15
TraesCSU01G210200.1	Wheat	extracellular	48.32	49.15
TraesCS5B01G161700.1	Wheat	golgi	48.88	48.75
Zm00001d015637_P001	Maize	extracellular	48.88	48.75
TraesCSU01G187000.1	Wheat	extracellular	46.65	48.41
TraesCS6D01G161900.1	Wheat	endoplasmic reticulum	48.6	48.2
TraesCS3D01G002900.1	Wheat	plastid	48.04	48.04
OQU84537	Sorghum	endoplasmic reticulum, extracellular	47.49	47.75
Zm00001d015636_P001	Maize	extracellular	47.77	47.37
HORVU6Hr1G035230.1	Barley	extracellular, golgi, mitochondrion	48.04	46.99
TraesCS7D01G384600.1	Wheat	endoplasmic reticulum, extracellular, golgi	47.49	46.7
TraesCS6B01G200500.1	Wheat	extracellular, golgi	46.37	46.63
TraesCS7B01G290600.1	Wheat	golgi	47.49	46.45
TraesCS6A01G172900.1	Wheat	extracellular, golgi	46.37	46.37
TraesCS6D01G162000.3	Wheat	extracellular, vacuole	46.09	46.35
TraesCS7A01G388700.1	Wheat	extracellular	47.21	46.3
OQU76903	Sorghum	plastid	46.93	46.28
Zm00001d014487_P001	Maize	plastid	46.65	45.88
Os09t0132200-01	Rice	extracellular	44.97	45.87
TraesCS5A01G164000.1	Wheat	extracellular, vacuole	45.25	45.76
EER96404	Sorghum	extracellular, vacuole	46.37	45.73
EER90082	Sorghum	golgi	46.93	45.65
Os02t0189200-01	Rice	extracellular	48.04	45.62
Os06t0636700-01	Rice	extracellular	48.6	45.55
HORVU7Hr1G092040.2	Barley	golgi	46.93	45.53
Zm00001d036770_P001	Maize	mitochondrion	47.21	45.43
HORVU0Hr1G012230.2	Barley	extracellular, vacuole	44.69	45.33
TraesCS5D01G169000.1	Wheat	extracellular	44.69	45.2
TraesCS5B01G161500.1	Wheat	extracellular	44.41	44.92
Zm00001d000061_P001	Maize	extracellular, golgi	43.85	44.73
Os09t0247600-01	Rice	extracellular, golgi	44.13	44.38
EES04670	Sorghum	extracellular	46.65	44.3
Zm00001d053252_P001	Maize	extracellular, golgi, mitochondrion	42.74	44.22
Zm00001d046642_P001	Maize	extracellular, golgi	47.77	43.96
EER94394	Sorghum	extracellular	43.58	43.7
HORVU6Hr1G035210.2	Barley	cytosol, peroxisome	49.16	43.56
TraesCS5D01G171800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.3	42.7
TraesCS5B01G164400.1	Wheat	endoplasmic reticulum, vacuole	43.3	42.58
TraesCS5A01G167400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.02	42.31
HORVU3Hr1G001200.2	Barley	mitochondrion	45.53	39.56
KRH17460	Soybean	nucleus	39.39	38.95
KRH61019	Soybean	extracellular, plasma membrane	38.55	38.66
KRH17461	Soybean	nucleus	39.66	38.59
KRH28831	Soybean	plasma membrane	39.39	38.52
KRH05977	Soybean	nucleus	39.94	38.44
KRH55990	Soybean	extracellular, plasma membrane, vacuole	39.11	38.36
KRH05980	Soybean	endoplasmic reticulum, golgi	38.55	38.02
KRH05976	Soybean	nucleus	39.39	37.9
KRH72763	Soybean	extracellular	38.27	37.64
KRH55993	Soybean	extracellular	37.99	37.57
KRH51681	Soybean	extracellular, plasma membrane	37.43	37.53
KRH17463	Soybean	endoplasmic reticulum, golgi	37.99	37.47
KRH51682	Soybean	extracellular, golgi	37.99	37.36
KRH61020	Soybean	endoplasmic reticulum, golgi, plastid	37.99	37.36
KRH55991	Soybean	extracellular	37.43	37.02
KRH20355	Soybean	extracellular, plasma membrane	37.99	36.86
KRH21336	Soybean	extracellular	37.43	36.61
KXG26546	Sorghum	mitochondrion, plastid	45.81	36.53
KRH10966	Soybean	extracellular	36.31	36.52
KRH05978	Soybean	plastid	38.27	36.34
KRH69760	Soybean	extracellular	36.59	36.19
KRH17462	Soybean	extracellular, plasma membrane, plastid	36.87	35.97
KRH50140	Soybean	extracellular, golgi, plasma membrane	36.87	35.87
KRH10964	Soybean	endoplasmic reticulum, plasma membrane	36.59	35.79
KRH73274	Soybean	extracellular	35.47	35.38
KRH69753	Soybean	extracellular, plasma membrane, vacuole	36.03	35.34
KRH08023	Soybean	extracellular	28.77	35.27
KRH21335	Soybean	extracellular, golgi	35.75	35.26
KRH72761	Soybean	extracellular	34.92	35.11
KRH08025	Soybean	extracellular, vacuole	34.92	34.15
KRH51683	Soybean	plasma membrane	27.09	33.92

Protein Annotations

EMBL:ACUP02008527	EnsemblPlants:KRH14825	EnsemblPlantsGene:GLYMA_14G050900	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF229	PFAM:PF00657	ProteinID:KRH14825	ProteinID:KRH14825.1	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000189D506	UniProt:A0A0R4J4Z9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr14:-:3977944..3980627

Molecular Weight (calculated)

39698.7 Da

IEP (calculated)

7.658

GRAVY (calculated)

-0.021

Length

358 amino acids

Sequence
(BLAST)

001: MEEGQRKTTT LLLCSHIVVL LLLSLVAETS AKVSAVIVFG DSSVDAGNNN FIPTIARSNF QPYGRDFEGG KATGRFCNGR IPTDFISESF GLKPYVPAYL
101: DPKYNISDFA SGVTFASAAT GYDNATSDVL SVIPLWKQLE YYKGYQKNLS AYLGESKAKE TVAEALHLMS LGTNDFLENY YTMPGRASQY TPQQYQIFLA
201: GIAENFIRSL YGLGARKISL GGLPPMGCLP LERTTNIVGG NDCVARYNNI ALEFNDKLKN LTIKLNQELP GLKLVFSNPY YIMLNIIKRP QLYGFESTSV
301: ACCATGMFEM GYACSRGQMF SCTDASKYVF WDSFHPTEMT NSIVAKYVVL RVLYQFLQ

Best Arabidopsis Sequence Match ( AT2G04570.1 )
(BLAST)

001: MGHLKSLFTI LFLIAMSSTV TFAGKIPAII VFGDSSVDAG NNNYIPTVAR SNFEPYGRDF VGGKPTGRFC NGKIATDFMS EALGLKPIIP AYLDPSYNIS
101: DFATGVTFAS AATGYDNATS DVLSVLPLWK QLEYYKEYQT KLKAYQGKDR GTETIESSLY LISIGTNDFL ENYFAFPGRS SQYSVSLYQD FLAGIAKEFV
201: KKLHGLGARK ISLGGLPPMG CMPLERATNI GTGGECVGRY NDIAVQFNSK LDKMVEKLSK ELPGSNLVFS NPYEPFMRII KNPSSFGFEV VGAACCATGM
301: FEMGYGCQRN NPFTCTNADK YVFWDSFHPT QKTNHIMANA LMNSTFPHFL

Arabidopsis Description

GDSL esterase/lipase At2g04570 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJB4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.