Factsheet for Bra004974.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

nucleus 2
extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70930	Canola	endoplasmic reticulum, vacuole	100.0	100.0
Bra017022.1-P	Field mustard	plasma membrane	86.91	86.91
AT2G40250.1	Thale cress	vacuole	80.5	80.06
KRH73274	Soybean	extracellular	50.97	50.97
Bra031550.1-P	Field mustard	cytosol, nucleus, peroxisome	42.34	46.48
Bra015541.1-P	Field mustard	extracellular	42.34	42.11
Bra021626.1-P	Field mustard	endoplasmic reticulum, extracellular	42.06	42.06
TraesCS3B01G383600.1	Wheat	extracellular	42.34	41.87
Os01t0832100-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	41.78	41.21
TraesCS3A01G351000.1	Wheat	extracellular	41.5	40.38
HORVU3Hr1G087670.3	Barley	extracellular	41.23	40.33
Os05t0468500-01	Rice	extracellular	40.39	40.28
Bra015542.1-P	Field mustard	endoplasmic reticulum, extracellular	40.11	40.22
TraesCS3D01G345100.1	Wheat	extracellular	41.23	40.11
Bra022848.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	36.77	40.0
GSMUA_Achr6P23650_001	Banana	extracellular	39.55	40.0
Bra015804.1-P	Field mustard	cytosol	33.7	39.54
TraesCS1D01G297500.1	Wheat	endoplasmic reticulum, vacuole	40.11	39.13
Bra013200.1-P	Field mustard	extracellular	38.16	38.92
TraesCS1A01G295000.1	Wheat	plastid	39.83	38.86
Zm00001d038411_P001	Maize	extracellular	37.88	38.86
TraesCS1B01G304400.1	Wheat	endoplasmic reticulum, extracellular	39.55	38.59
Bra003736.1-P	Field mustard	extracellular, plasma membrane	38.44	38.12
Bra015802.1-P	Field mustard	extracellular	38.16	37.85
Bra035295.1-P	Field mustard	mitochondrion	30.08	37.5
Bra022003.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	39.55	37.47
HORVU1Hr1G070790.1	Barley	extracellular, plastid	39.83	37.43
Bra026402.1-P	Field mustard	extracellular	36.49	37.32
Bra022002.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	35.65	37.1
Zm00001d010584_P001	Maize	endoplasmic reticulum, extracellular, vacuole	36.77	37.08
Bra015803.1-P	Field mustard	cytosol	35.65	36.99
Bra004735.1-P	Field mustard	extracellular	34.26	36.5
Bra003737.1-P	Field mustard	cytosol, plastid	32.59	36.34
Bra026636.1-P	Field mustard	extracellular	35.1	36.1
Bra010987.1-P	Field mustard	plasma membrane	34.54	35.63
Bra021725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	42.62	35.5
OQU78161	Sorghum	extracellular	38.16	35.31
Bra027858.1-P	Field mustard	extracellular	34.26	35.24
Bra027951.1-P	Field mustard	extracellular	33.98	34.96
Bra027859.1-P	Field mustard	extracellular	33.7	34.67
Bra027950.1-P	Field mustard	extracellular	33.7	34.57
Bra018234.1-P	Field mustard	endoplasmic reticulum, vacuole	40.67	33.56
Bra016475.1-P	Field mustard	plastid	35.38	33.51
Bra012211.1-P	Field mustard	endoplasmic reticulum, plasma membrane	35.93	30.79
Bra012212.1-P	Field mustard	plastid	33.98	15.42
Bra025794.1-P	Field mustard	plasma membrane	35.1	14.16

Protein Annotations

EnsemblPlants:Bra004974.1	EnsemblPlants:Bra004974.1-P	EnsemblPlantsGene:Bra004974	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
ncoils:Coil	PANTHER:PTHR22835	PANTHER:PTHR22835:SF152	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52266	UniParc:UPI00025472DD	UniProt:M4CL88	MapMan:35.1	:	:

Description

AT2G40250 (E=8e-164) | GDSL-motif lipase/hydrolase family protein

Coordinates

chrA05:-:2737119..2738945

Molecular Weight (calculated)

39669.9 Da

IEP (calculated)

8.525

GRAVY (calculated)

-0.004

Length

359 amino acids

Sequence
(BLAST)

001: MNPTHDKPIL LTLFTLILQL SNAINASPSP PITALYAFGD STVDSGNNNY IPTLFRSNHS PYGRSFPAKL STGRFSDGKL ATDFLASSLG LKSTIPAYLD
101: PSVKPLDLLT GVSFASAGGG LDDRTAMLSL TLTMDKQWSY FEEAVRKMKS VVGESETNRV IKNAWFVISA GTNDMIFNVY DHVLGSFISV SDYQDYLLRN
201: VEAFVQRLHD AGARRITVAG LPPIGCLPVQ VTLGTVTLPR IFHKRICTEN QNTDSQLYNQ KLLKLNFLFS QRLRGSKILY LDIYTPIMDM IKHPYKYGLE
301: ETLKGCCGTG FLEAGPLCKS LSGTCDDVSK YLFFDSVHPT QKAYSVIATY ALQKLLPLL

Best Arabidopsis Sequence Match ( AT2G40250.1 )
(BLAST)

001: MNRNQHKPMF VTFLINILLL QLLNLTNASP SPPITALYAF GDSTVDSGNN NYIPTLFQSN HPPYGKSFPS KLSTGRFSDG KLATDFIVSS LGLKPTLPAY
101: LNPSVKPVDL LTGVSFASAG GGLDDRTAKS SLTITMDKQW SYFEEALGKM KSLVGDSETN RVIKNAVFVI SAGTNDMIFN VYDHVLGSLI SVSDYQDSLL
201: TKVEVFVQRL YEAGARRITI AGLPPIGCLP VQVTLTSINT PRIFHHRICT EHQNDDSRVY NQKLQKLIFG LSQRFRGSKV LYLDIYSPLI DMIKHPRKYG
301: LEETLRGCCG TGLLEAGPLC QPLSRTCDDV SKYLFFDSVH PSQTAYSVIA SFALQKLFPL L

Arabidopsis Description

GDSL esterase/lipase At2g40250 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIZ6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.