Factsheet for Bra017022.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07069	Canola	plasma membrane	100.0	100.0
Bra004974.1-P	Field mustard	endoplasmic reticulum, vacuole	86.91	86.91
AT2G40250.1	Thale cress	vacuole	84.12	83.66
KRH73274	Soybean	extracellular	49.58	49.58
Bra031550.1-P	Field mustard	cytosol, nucleus, peroxisome	42.62	46.79
Bra021626.1-P	Field mustard	endoplasmic reticulum, extracellular	42.34	42.34
GSMUA_Achr6P23650_001	Banana	extracellular	41.78	42.25
TraesCS3B01G383600.1	Wheat	extracellular	42.62	42.15
Os01t0832100-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	42.62	42.03
Os05t0468500-01	Rice	extracellular	42.06	41.94
TraesCS1D01G297500.1	Wheat	endoplasmic reticulum, vacuole	42.34	41.3
Bra015541.1-P	Field mustard	extracellular	41.5	41.27
TraesCS3D01G345100.1	Wheat	extracellular	42.34	41.19
TraesCS3A01G351000.1	Wheat	extracellular	42.34	41.19
HORVU3Hr1G087670.3	Barley	extracellular	42.06	41.14
TraesCS1A01G295000.1	Wheat	plastid	42.06	41.03
TraesCS1B01G304400.1	Wheat	endoplasmic reticulum, extracellular	42.06	41.03
Zm00001d038411_P001	Maize	extracellular	39.83	40.86
Bra015542.1-P	Field mustard	endoplasmic reticulum, extracellular	40.67	40.78
Bra022848.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	37.05	40.3
HORVU1Hr1G070790.1	Barley	extracellular, plastid	42.34	39.79
Zm00001d010584_P001	Maize	endoplasmic reticulum, extracellular, vacuole	38.16	38.48
Bra015804.1-P	Field mustard	cytosol	32.59	38.24
Bra022003.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	40.11	37.99
Bra004735.1-P	Field mustard	extracellular	35.65	37.98
Bra026402.1-P	Field mustard	extracellular	37.05	37.89
Bra013200.1-P	Field mustard	extracellular	37.05	37.78
Bra015803.1-P	Field mustard	cytosol	35.93	37.28
Bra003736.1-P	Field mustard	extracellular, plasma membrane	37.33	37.02
Bra015802.1-P	Field mustard	extracellular	37.33	37.02
OQU78161	Sorghum	extracellular	39.83	36.86
Bra022002.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	35.38	36.81
Bra035295.1-P	Field mustard	mitochondrion	28.97	36.11
Bra010987.1-P	Field mustard	plasma membrane	34.82	35.92
Bra026636.1-P	Field mustard	extracellular	34.54	35.53
Bra021725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	42.34	35.27
Bra027858.1-P	Field mustard	extracellular	33.98	34.96
Bra003737.1-P	Field mustard	cytosol, plastid	31.2	34.78
Bra027859.1-P	Field mustard	extracellular	33.43	34.38
Bra027951.1-P	Field mustard	extracellular	33.43	34.38
Bra027950.1-P	Field mustard	extracellular	33.43	34.29
Bra018234.1-P	Field mustard	endoplasmic reticulum, vacuole	41.23	34.02
Bra016475.1-P	Field mustard	plastid	35.65	33.77
Bra012211.1-P	Field mustard	endoplasmic reticulum, plasma membrane	38.16	32.7
Bra012212.1-P	Field mustard	plastid	34.26	15.55
Bra025794.1-P	Field mustard	plasma membrane	34.82	14.04

Protein Annotations

EnsemblPlants:Bra017022.1	EnsemblPlants:Bra017022.1-P	EnsemblPlantsGene:Bra017022	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF152	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266
UniParc:UPI0002544F2B	UniProt:M4DKJ2	MapMan:35.1	:	:	:

Description

AT2G40250 (E=6e-164) | GDSL-motif lipase/hydrolase family protein

Coordinates

chrA04:+:17084647..17086605

Molecular Weight (calculated)

39795.3 Da

IEP (calculated)

8.882

GRAVY (calculated)

-0.021

Length

359 amino acids

Sequence
(BLAST)

001: MNPNHHKPIL LIFFTLLLQL PNPINASPSP PITALYAFGD STVDSGNNNY IPTLFQSNHP PYGRSFPAKL STGRFSDGKL ATDFIASSLG LKPTLPAYLN
101: PSVKPVDLLT GVSFASAGGG LDDRTAMMSL TLTMDKQWSY FEEAVRKMKS VVGDLEANRV IKNALFVISA GTNDMIYNVY DHVLGRFISV SDYQDYLLSK
201: VEAFIQRLHD AGARRITVAG LPPIGCLPVQ VTLGTITIPR IFHHRICTEN QNADSQLYNQ KLQKLNFRLS QRLPGSKVLY LDIYTPLIDM IKHPHRYGLE
301: ETLVGCCGTG LLEAGPLCKP LSRTCEDVSK YMFFDSVHPS QKAYSVIATY AFKKLFPLL

Best Arabidopsis Sequence Match ( AT2G40250.1 )
(BLAST)

001: MNRNQHKPMF VTFLINILLL QLLNLTNASP SPPITALYAF GDSTVDSGNN NYIPTLFQSN HPPYGKSFPS KLSTGRFSDG KLATDFIVSS LGLKPTLPAY
101: LNPSVKPVDL LTGVSFASAG GGLDDRTAKS SLTITMDKQW SYFEEALGKM KSLVGDSETN RVIKNAVFVI SAGTNDMIFN VYDHVLGSLI SVSDYQDSLL
201: TKVEVFVQRL YEAGARRITI AGLPPIGCLP VQVTLTSINT PRIFHHRICT EHQNDDSRVY NQKLQKLIFG LSQRFRGSKV LYLDIYSPLI DMIKHPRKYG
301: LEETLRGCCG TGLLEAGPLC QPLSRTCDDV SKYLFFDSVH PSQTAYSVIA SFALQKLFPL L

Arabidopsis Description

GDSL esterase/lipase At2g40250 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIZ6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.