Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G136400.1 | Wheat | nucleus | 87.94 | 84.93 |
| TraesCS6D01G095700.1 | Wheat | nucleus | 86.52 | 84.14 |
| Os02t0137800-01 | Rice | nucleus | 70.92 | 66.67 |
| GSMUA_Achr9P14200_001 | Banana | nucleus | 44.68 | 54.78 |
| Zm00001d015211_P001 | Maize | nucleus | 61.7 | 53.7 |
| EES04487 | Sorghum | nucleus | 64.54 | 53.22 |
| GSMUA_Achr8P23810_001 | Banana | nucleus | 42.55 | 52.17 |
| KRG88883 | Soybean | cytosol | 17.73 | 37.31 |
| Solyc12g096270.1.1 | Tomato | cytosol | 28.37 | 34.19 |
| Solyc08g005950.2.1 | Tomato | cytosol | 30.5 | 33.86 |
| PGSC0003DMT400082780 | Potato | cytosol | 29.79 | 33.33 |
| TraesCS5A01G377700.1 | Wheat | cytosol | 22.7 | 32.65 |
| KRH16102 | Soybean | nucleus | 29.08 | 32.54 |
| VIT_04s0008g03160.t01 | Wine grape | nucleus, plastid | 28.37 | 31.5 |
| KRH04991 | Soybean | cytosol | 29.08 | 31.3 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G107800.1 | EnsemblPlantsGene:TraesCS6A01G107800 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007186 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | InterPro:G-protein_gamma-like_dom |
| InterPro:IPR015898 | ncoils:Coil | PANTHER:PTHR35129 | PANTHER:PTHR35129:SF1 | PFAM:PF00631 | SEG:seg |
| SMART:SM01224 | TIGR:cd00890 | MapMan:26.8.1.1.2.3 | MapMan:27.6.2.3 | : | : |
Description
No Description!
Coordinates
chr6A:+:76625349..76630685
Molecular Weight (calculated)
15737.9 Da
IEP (calculated)
4.721
GRAVY (calculated)
-1.209
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGEANGGDR RPRDEEEPPQ QPEEEQDRTS RPSSGQQQQP AAAGAAATTR SVGYVGKHRL SAAIQRLDQE LQSLQDELNE LETMEPASAA CREVITSTEG
101: KPDPLLPITS SPENSSWDRW FQRVRSSRSN KWWQSKGSDF A
101: KPDPLLPITS SPENSSWDRW FQRVRSSRSN KWWQSKGSDF A
001: MEGKSRFESE RERLRRQFKL VRTKTRLSLT LSDLRPASER MREETVVYEQ EESVSHGGGK HRILAELARV EQEVAFLEKE LKEVENTDIV STVCEELLSV
101: IEKGPDPLLP LTNGPLNLGW DRWFEGPNGG EGCRCLIL
101: IEKGPDPLLP LTNGPLNLGW DRWFEGPNGG EGCRCLIL
Arabidopsis Description
AGG1Ggamma-subunit 1 [Source:TAIR;Acc:AT3G63420]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.