Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6D01G095700.1 | Wheat | nucleus | 95.89 | 96.55 |
TraesCS6A01G107800.1 | Wheat | nucleus | 84.93 | 87.94 |
Os02t0137800-01 | Rice | nucleus | 69.18 | 67.33 |
GSMUA_Achr9P14200_001 | Banana | nucleus | 43.15 | 54.78 |
Zm00001d015211_P001 | Maize | nucleus | 59.59 | 53.7 |
EES04487 | Sorghum | nucleus | 62.33 | 53.22 |
GSMUA_Achr8P23810_001 | Banana | nucleus | 40.41 | 51.3 |
KRG88883 | Soybean | cytosol | 17.12 | 37.31 |
Solyc12g096270.1.1 | Tomato | cytosol | 27.4 | 34.19 |
Solyc08g005950.2.1 | Tomato | cytosol | 29.45 | 33.86 |
PGSC0003DMT400082780 | Potato | cytosol | 28.77 | 33.33 |
TraesCS5B01G381300.1 | Wheat | cytosol | 21.92 | 32.65 |
KRH16102 | Soybean | nucleus | 27.4 | 31.75 |
KRH04991 | Soybean | cytosol | 28.08 | 31.3 |
VIT_04s0008g03160.t01 | Wine grape | nucleus, plastid | 26.03 | 29.92 |
Protein Annotations
EnsemblPlants:TraesCS6B01G136400.1 | EnsemblPlantsGene:TraesCS6B01G136400 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0007154 |
GO:GO:0007165 | GO:GO:0007186 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | InterPro:G-protein_gamma-like_dom |
InterPro:IPR015898 | ncoils:Coil | PANTHER:PTHR35129 | PANTHER:PTHR35129:SF1 | PFAM:PF00631 | SEG:seg |
SMART:SM01224 | TIGR:cd00890 | MapMan:26.8.1.1.2.3 | MapMan:27.6.2.3 | : | : |
Description
No Description!
Coordinates
chr6B:+:133841813..133846945
Molecular Weight (calculated)
16312.4 Da
IEP (calculated)
4.493
GRAVY (calculated)
-1.242
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGEANGGDR RPRDEEGEEE EEPPQQQEEE RAARPSSGQQ QQQPAAAGAA TTTTRSVGYV GKHRLSAAIQ RLDQELQSLQ DELNELETME PASAACREVI
101: TSTEGKPDPL LPITSSPENS SWDRWFQRVR SSRSNKWWQS KGSDFA
101: TSTEGKPDPL LPITSSPENS SWDRWFQRVR SSRSNKWWQS KGSDFA
1: MEAGSSNSSG QLSGRVVDTR GKHRIQAELK RLEQEARFLE EELEQLEKMD NASASCKEFL DSVDSKPDPL LPETTGPVNA TWDQWFEGPK EAKRCGCSIL
Arabidopsis Description
GG2AtGG2 [Source:UniProtKB/TrEMBL;Acc:A0A178V974]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.