Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G136400.1 | Wheat | nucleus | 96.55 | 95.89 |
| TraesCS6A01G107800.1 | Wheat | nucleus | 84.14 | 86.52 |
| Os02t0137800-01 | Rice | nucleus | 67.59 | 65.33 |
| GSMUA_Achr9P14200_001 | Banana | nucleus | 42.76 | 53.91 |
| Zm00001d015211_P001 | Maize | nucleus | 59.31 | 53.09 |
| EES04487 | Sorghum | nucleus | 60.69 | 51.46 |
| GSMUA_Achr8P23810_001 | Banana | nucleus | 40.0 | 50.43 |
| KRG88883 | Soybean | cytosol | 17.24 | 37.31 |
| Solyc12g096270.1.1 | Tomato | cytosol | 28.28 | 35.04 |
| Solyc08g005950.2.1 | Tomato | cytosol | 30.34 | 34.65 |
| PGSC0003DMT400082780 | Potato | cytosol | 29.66 | 34.13 |
| TraesCS5D01G387700.2 | Wheat | cytosol | 22.07 | 32.0 |
| KRH16102 | Soybean | nucleus | 26.9 | 30.95 |
| KRH04991 | Soybean | cytosol | 27.59 | 30.53 |
| VIT_04s0008g03160.t01 | Wine grape | nucleus, plastid | 26.21 | 29.92 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G095700.1 | EnsemblPlantsGene:TraesCS6D01G095700 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007186 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | InterPro:G-protein_gamma-like_dom |
| InterPro:IPR015898 | ncoils:Coil | PANTHER:PTHR35129 | PANTHER:PTHR35129:SF1 | PFAM:PF00631 | SEG:seg |
| SMART:SM01224 | TIGR:cd00890 | MapMan:26.8.1.1.2.3 | MapMan:27.6.2.3 | : | : |
Description
No Description!
Coordinates
chr6D:+:60131396..60137203
Molecular Weight (calculated)
16299.4 Da
IEP (calculated)
4.387
GRAVY (calculated)
-1.216
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGEANGGDR RPRDEEGEEE EEPPQQQEEE RAARPSSEQQ QPVAAEAAAT TTTRSVGYVG KHRLSAAIQR LDQELQSLQD ELNELETMEP ASAACREVIT
101: STEGKPDPLL PITSSPENSS WDRWFQRVRS SRSNKWWQSK GSDFA
101: STEGKPDPLL PITSSPENSS WDRWFQRVRS SRSNKWWQSK GSDFA
1: MREETVVYEQ EESVSHGGGK HRILAELARV EQEVAFLEKE LKEVENTDIV STVCEELLSV IEKGPDPLLP LTNGPLNLGW DRWFEGPNGG EGCRCLIL
Arabidopsis Description
AGG1Ggamma-subunit 1 [Source:TAIR;Acc:AT3G63420]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.