Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G354500.1 | Wheat | cytosol | 93.63 | 93.63 |
| TraesCS1B01G449500.1 | Wheat | cytoskeleton, cytosol, nucleus | 88.73 | 89.6 |
| EES19889 | Sorghum | cytoskeleton, cytosol, nucleus | 82.35 | 83.58 |
| Zm00001d009440_P001 | Maize | cytoskeleton, cytosol, nucleus | 81.86 | 83.08 |
| Os05t0579800-01 | Rice | cytosol | 81.37 | 82.59 |
| Zm00001d038881_P001 | Maize | cytoskeleton, cytosol, nucleus | 78.43 | 80.81 |
| GSMUA_Achr1P03050_001 | Banana | cytosol | 75.49 | 78.97 |
| HORVU5Hr1G110350.1 | Barley | cytosol, nucleus, plastid | 39.22 | 74.77 |
| TraesCS3B01G195200.1 | Wheat | nucleus | 25.0 | 33.77 |
Protein Annotations
| MapMan:13.3.4.1.1.3.2 | Gene3D:2.60.120.260 | InterPro:APC10/Doc1 | InterPro:APC_su10/DOC_dom | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005680 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031145 | InterPro:Galactose-bd-like_sf | InterPro:IPR004939 | InterPro:IPR008979 |
| PFAM:PF03256 | PIRSF:PIRSF028841 | PFscan:PS51284 | PANTHER:PTHR12936 | SMART:SM01337 | SUPFAM:SSF49785 |
| EnsemblPlantsGene:TraesCS6B01G407600 | EnsemblPlants:TraesCS6B01G407600.1 | TIGR:cd08366 | : | : | : |
Description
No Description!
Coordinates
chr6B:+:682119634..682123129
Molecular Weight (calculated)
22578.9 Da
IEP (calculated)
7.214
GRAVY (calculated)
-0.295
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MESDGEQEAA ATPTLGASAG APVAGQLKGC PELSLEGDMR EMAKTAVWSV SSSKPGNGVA SLRDDSLDTY WQSDGAQPHL VNIQFQKKVQ LQHVVLYVDF
101: KLDESYTPNK ISIRAGDGFH NLKEIKTVEL SKSVGWVHIS LSGTDPRETF VRTFMLQIAV LANHLNGRDT HVRQIKIYGP RLNPVPHQPF IFISRECIMY
201: STIR
101: KLDESYTPNK ISIRAGDGFH NLKEIKTVEL SKSVGWVHIS LSGTDPRETF VRTFMLQIAV LANHLNGRDT HVRQIKIYGP RLNPVPHQPF IFISRECIMY
201: STIR
001: MATESSESEE EGKISGGNYK LIIDDDLREM GKNAAWSVSS CKPGNGVTTL RDDNLETYWQ SDGLQPHLIN IQFQKKVKLQ LVVLYVDFKL DESYTPSKIS
101: IRAGDGFHNL KEIKSVELVK PTGWVCLSLS GTDPRETFVN TFMLQIAILS NHLNGRDTHI RQIKVYGPRP NPIPHQPFQF TSMEFLTYST LR
101: IRAGDGFHNL KEIKSVELVK PTGWVCLSLS GTDPRETFVN TFMLQIAILS NHLNGRDTHI RQIKVYGPRP NPIPHQPFQF TSMEFLTYST LR
Arabidopsis Description
APC10Anaphase-promoting complex subunit 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPW2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.