Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G201500.1 | Wheat | nucleus | 84.21 | 93.08 |
| TraesCS7B01G309100.1 | Wheat | nucleus | 37.64 | 42.09 |
| Os06t0248400-01 | Rice | nucleus | 31.28 | 39.77 |
| TraesCS4B01G235000.1 | Wheat | nucleus | 9.95 | 22.1 |
| TraesCS5B01G557500.2 | Wheat | nucleus | 12.1 | 20.42 |
| TraesCS1B01G210300.4 | Wheat | peroxisome | 12.1 | 20.03 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G105400.1 | EnsemblPlantsGene:TraesCS7B01G105400 | Gene3D:3.90.228.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003950 |
| GO:GO:0016740 | InterPro:IPR012317 | InterPro:Poly(ADP-ribose)pol_cat_dom | InterPro:RST | InterPro:WWE_dom_sf | PANTHER:PTHR32263 |
| PANTHER:PTHR32263:SF9 | PFAM:PF12174 | PFscan:PS51059 | SEG:seg | SUPFAM:SSF117839 | SUPFAM:SSF56399 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:121762079..121767234
Molecular Weight (calculated)
105240.0 Da
IEP (calculated)
8.607
GRAVY (calculated)
-0.339
Length
975 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPLEKSKAL CLKRKPDDDC LAKNSKSHRT EIDNVSSKVH SGSSSDLPIR SCHSQPNLAN DCVNYLKSGA PSRVVFYKQG SWCDFPDKIV TSIVDAFGGD
101: KSSIVVVMDD QPLLIDFLSM TLVNLKTRKQ RSVAWLDGTN NWSFPSSFFD EEVEESAKLS RNVVEGAALG SVRGNVMKSP SDVAKQAMLE ASPPVIQSSC
201: ALDILRKKIV HVERGSESFL FVQNLFLSGM GSFAVPNNIL HIHRYSPKDI PAQRRLEAFE KQLRLTGQKS GNANAKYGWL GSRKQDIVSV IVNGFVSTGK
301: NTHDTAMADG IYLSPENRAF TSVGLCDVDE KGVQYMLLCR AILGKTGVIK SGSQEEFLGI YDSGVDDCSN PNYYVIWPSH RSTNISLEYL ISFRLAPKVQ
401: EYFRSLKGLW LRPPPGEVKV DPSILQPVLC QTDEGPTSPW ISFRLLFETI QDNISALARE LLYRHYEELK ENKITRDEMV KKMMVIVGEK LLLDSLTKLK
501: YSPSLWYNSP AKNTSYSAAL GSGCIGTSTD VAVSATPSHD GPSSSVLREN CEPVNPTRGG SPANAVRGQH SPTPSMCSDS SSSRCTNSQY PFEPMVAPLG
601: HDALVRSALL SVNGLDSAGP SMEYNGHDTL ARSCSEGHDS HVSRPTLGNS ASVSMEGLHS AAPGTTPAAH DALASNRANE SVAATPGVSC QAYTPSRVPQ
701: FSAATSMAPE LCAPRSMAPH LRAPRSMAPE LCAPRSMVPH LRAPRSMAPE LCAPRSMAPH LRAPRSMAPE LCAPRSNAPH LRAPRSMAPE LCAPRSNSPH
801: LRAPRSMAPE LCAPRSNAPH LRAPRSMVPE LCAPRSMAPH LCAPSMAPHL HVRSKVPKVP AKKTMPEANY SSTATVVPVI CKPPSSGVLP KDNGLPKSSK
901: ECMASSLVLQ GPDCPANRAT ELQNTPNLKN VAPKNPTAQC GSNKNLPRIG VDESSTPAYA AGRLIALSAD GEKGP
101: KSSIVVVMDD QPLLIDFLSM TLVNLKTRKQ RSVAWLDGTN NWSFPSSFFD EEVEESAKLS RNVVEGAALG SVRGNVMKSP SDVAKQAMLE ASPPVIQSSC
201: ALDILRKKIV HVERGSESFL FVQNLFLSGM GSFAVPNNIL HIHRYSPKDI PAQRRLEAFE KQLRLTGQKS GNANAKYGWL GSRKQDIVSV IVNGFVSTGK
301: NTHDTAMADG IYLSPENRAF TSVGLCDVDE KGVQYMLLCR AILGKTGVIK SGSQEEFLGI YDSGVDDCSN PNYYVIWPSH RSTNISLEYL ISFRLAPKVQ
401: EYFRSLKGLW LRPPPGEVKV DPSILQPVLC QTDEGPTSPW ISFRLLFETI QDNISALARE LLYRHYEELK ENKITRDEMV KKMMVIVGEK LLLDSLTKLK
501: YSPSLWYNSP AKNTSYSAAL GSGCIGTSTD VAVSATPSHD GPSSSVLREN CEPVNPTRGG SPANAVRGQH SPTPSMCSDS SSSRCTNSQY PFEPMVAPLG
601: HDALVRSALL SVNGLDSAGP SMEYNGHDTL ARSCSEGHDS HVSRPTLGNS ASVSMEGLHS AAPGTTPAAH DALASNRANE SVAATPGVSC QAYTPSRVPQ
701: FSAATSMAPE LCAPRSMAPH LRAPRSMAPE LCAPRSMVPH LRAPRSMAPE LCAPRSMAPH LRAPRSMAPE LCAPRSNAPH LRAPRSMAPE LCAPRSNSPH
801: LRAPRSMAPE LCAPRSNAPH LRAPRSMVPE LCAPRSMAPH LCAPSMAPHL HVRSKVPKVP AKKTMPEANY SSTATVVPVI CKPPSSGVLP KDNGLPKSSK
901: ECMASSLVLQ GPDCPANRAT ELQNTPNLKN VAPKNPTAQC GSNKNLPRIG VDESSTPAYA AGRLIALSAD GEKGP
001: MEAKIVKVLD SSRCEDGFGK KRKRAASYAA YVTGVSCAKL QNVPPPNGQC QIPDKRRRLE GENKLSAYEN RSGKALVRYY TYFKKTGIAK RVMMYENGEW
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNQGARGS GSANSVGSST
501: TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNQGARGS GSANSVGSST
501: TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL
Arabidopsis Description
RCD1Poly [ADP-ribose] polymerase [Source:UniProtKB/TrEMBL;Acc:M5BF30]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.