Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G105400.1 | Wheat | nucleus | 93.08 | 84.21 |
| TraesCS7D01G402500.1 | Wheat | nucleus | 41.61 | 42.04 |
| Os06t0248400-01 | Rice | nucleus | 34.58 | 39.77 |
| TraesCS4D01G236400.2 | Wheat | nucleus | 11.56 | 23.23 |
| TraesCS5D01G551800.3 | Wheat | nucleus | 13.49 | 20.59 |
| TraesCS1D01G199200.1 | Wheat | cytosol, nucleus, plastid | 13.27 | 19.76 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G201500.1 | EnsemblPlantsGene:TraesCS7D01G201500 | Gene3D:3.90.228.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003950 |
| GO:GO:0016740 | InterPro:IPR012317 | InterPro:Poly(ADP-ribose)pol_cat_dom | InterPro:RST | InterPro:WWE_dom_sf | PANTHER:PTHR32263 |
| PANTHER:PTHR32263:SF9 | PFAM:PF12174 | PFscan:PS51059 | SEG:seg | SUPFAM:SSF117839 | SUPFAM:SSF56399 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:160548938..160554317
Molecular Weight (calculated)
95325.5 Da
IEP (calculated)
8.332
GRAVY (calculated)
-0.327
Length
882 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPLQKSKAL CLKRKPDDDC LAKNSKSHRT EIDNVSSKVH SGSSSDLPAH SCHSQPNLAN DCVNYLKSGA PSRVMFYKQG SWCDFPDKIV TSIVDAFGGD
101: KSSIVVVMDD QPLLIDFLSM TLVNLKTRKQ RSVAWLDGTN NWSFPSSFFD EEVEESAKLS RNVVEGAALG SIRGNGMKSP SDVAKQAMLE ASPPVIQSSC
201: ALDILRKKIV HVERGSESFL FVQNLFLSGM GSFAVPNNIL HIHRYSPKDI PAQRRLEAFE KQLRLTGQKS GNANAKYGWL GSRKQDIVSV MVNGFVSTGE
301: NTRDTAMADG IYLSPENRAF TSVGLCDVDE KGVQYMLLCR AILGKTGVIK PGSQEEFLGI YDSSVDDCSN PNYYVIWPSH RSTNISLEYL ISFRLAPKVQ
401: EYVRSLKGLW LRPPPGEVKV DPSILQPVLC QTDEGPTSPW ISFRLLFETI QDSISSLARE LLYRHYEELK ENKITRDEMV KKMMIIVGEK LLLDSLTKLK
501: YSPSLWYNSP AKSTSYSAAL GSVGIGTGTD VVSATPSHDG PAPSVLRENC EPVNSTRGGS PANAVRGQHS PTPSMCSDSS SSRCTNSQYP FEPMVAHLGH
601: DALVRSALLS VNGLDSAGPS MEYNGHDTLA RSSSEGHDSH VSGPTLGNSA SVSMEGLHSA APGRTPEAHD ALASNRAHES VAATPGVSCQ AYTPSRIPQF
701: SAATSMAPEL RAPRSMAPHL RAPRSMAPEL CAPRSMAPHL CAPRSMAPHL RAPRSMAPEL CAPRSMAPLL RAPKSMAPHL HARSKVAKVP AKKTMPEANY
801: SSAATVVPVI CKPPSSSVLP KEKSHPTSSK ECMTSENVAP QNLAAQCGSN KSLPRIGVDG SSTAAYSADR LVTLSAEGEK CL
101: KSSIVVVMDD QPLLIDFLSM TLVNLKTRKQ RSVAWLDGTN NWSFPSSFFD EEVEESAKLS RNVVEGAALG SIRGNGMKSP SDVAKQAMLE ASPPVIQSSC
201: ALDILRKKIV HVERGSESFL FVQNLFLSGM GSFAVPNNIL HIHRYSPKDI PAQRRLEAFE KQLRLTGQKS GNANAKYGWL GSRKQDIVSV MVNGFVSTGE
301: NTRDTAMADG IYLSPENRAF TSVGLCDVDE KGVQYMLLCR AILGKTGVIK PGSQEEFLGI YDSSVDDCSN PNYYVIWPSH RSTNISLEYL ISFRLAPKVQ
401: EYVRSLKGLW LRPPPGEVKV DPSILQPVLC QTDEGPTSPW ISFRLLFETI QDSISSLARE LLYRHYEELK ENKITRDEMV KKMMIIVGEK LLLDSLTKLK
501: YSPSLWYNSP AKSTSYSAAL GSVGIGTGTD VVSATPSHDG PAPSVLRENC EPVNSTRGGS PANAVRGQHS PTPSMCSDSS SSRCTNSQYP FEPMVAHLGH
601: DALVRSALLS VNGLDSAGPS MEYNGHDTLA RSSSEGHDSH VSGPTLGNSA SVSMEGLHSA APGRTPEAHD ALASNRAHES VAATPGVSCQ AYTPSRIPQF
701: SAATSMAPEL RAPRSMAPHL RAPRSMAPEL CAPRSMAPHL CAPRSMAPHL RAPRSMAPEL CAPRSMAPLL RAPKSMAPHL HARSKVAKVP AKKTMPEANY
801: SSAATVVPVI CKPPSSSVLP KEKSHPTSSK ECMTSENVAP QNLAAQCGSN KSLPRIGVDG SSTAAYSADR LVTLSAEGEK CL
001: MEAKIVKVLD SSRCEDGFGK KRKRAASYAA YVTGVSCAKL QNVPPPNGQC QIPDKRRRLE GENKLSAYEN RSGKALVRYY TYFKKTGIAK RVMMYENGEW
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNQGARGS GSANSVGSST
501: TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNQGARGS GSANSVGSST
501: TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL
Arabidopsis Description
RCD1Poly [ADP-ribose] polymerase [Source:UniProtKB/TrEMBL;Acc:M5BF30]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.