Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G409200.2 | Wheat | nucleus | 96.56 | 98.25 |
| TraesCS7B01G309100.1 | Wheat | nucleus | 97.94 | 98.05 |
| HORVU7Hr1G095570.3 | Barley | nucleus | 93.24 | 90.44 |
| EES15499 | Sorghum | nucleus | 65.41 | 63.16 |
| Os04t0672200-01 | Rice | extracellular | 67.35 | 61.31 |
| Zm00001d052295_P024 | Maize | cytosol | 63.46 | 58.81 |
| TraesCS7D01G201500.1 | Wheat | nucleus | 42.04 | 41.61 |
| TraesCS4D01G236400.2 | Wheat | nucleus | 12.14 | 24.15 |
| TraesCS5D01G551800.3 | Wheat | nucleus | 14.78 | 22.32 |
| TraesCS1D01G199200.1 | Wheat | cytosol, nucleus, plastid | 15.01 | 22.13 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G402500.1 | EnsemblPlantsGene:TraesCS7D01G402500 | Gene3D:3.90.228.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003950 |
| GO:GO:0016740 | InterPro:IPR012317 | InterPro:Poly(ADP-ribose)pol_cat_dom | InterPro:RST | PANTHER:PTHR32263 | PANTHER:PTHR32263:SF9 |
| PFAM:PF00644 | PFAM:PF12174 | PFscan:PS51059 | SEG:seg | SUPFAM:SSF56399 | MapMan:35.1 |
Description
No Description!
Coordinates
chr7D:+:519959654..519967615
Molecular Weight (calculated)
93428.8 Da
IEP (calculated)
6.576
GRAVY (calculated)
-0.311
Length
873 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPQESKPL CLKRKLVDNC LSKDCKSRRV VVDNGPSDPS AKRCKCCCTR PNLASDCVNY LKSGVPSRIV FYKQDSWHNF PELIMKSLIE GFKGGKSSVV
101: AVMDDEPVLV DFLSMSLVNL QTRKQRSVAW YDDTGKGFFP SLFFDEEGDE TANLDSSNVE DGAQGIMLDK AVSSPEEVVK QVVLESGPPG PHKPSTADIL
201: RKKITSVERG SEDFLLVQDL FLSGMGPFAT PNNILHIHRY SPNDITAQCR LQAFEKQMSC TKEDRGDSNV RYGWLGSTKS DIVRILINGF GNTGKPAEKA
301: CLSAGVYLSP EDRAFTSVGL CDVDEKAVQY MLLCRVILGN MEAITPGSQD SFPSSEIYDS GVDDCSNPKC YVMWPSHLNT HIRLEYLVSF RLSPKVRNYL
401: LGLKGLWFHP SPKEVAMDIS TLQPIMGETG EAPTSPWISF RVLFAMIQDN ISSVAKELLF HHYEELKENE ISREEMVKKM IIIVGEKLLL ETLKKLHYCP
501: SLWHKSSVEV MSSDPARVAA EDPARTTEEY ISLDKTTGHC ALTLGNLGDS CGPNTLAESS TALSTKGCDT LAVATVPKSH DSVAPSSVPE TSTSSGGICL
601: ASPSVKPKSR DSPIRIMSPE SSANHGAKNQ DPSAARMAPT LHDVLRRTAS GKSASRGAEG SNGVAPSMRP HGYASPAPTN ASKGRGIGAP GLSLKGSECP
701: GPVLALGSTK FRGMKSPSSV PRMTPEGPEF LSLSIAPQSQ VIYPTKCHGG DLSSSVAAPA HVPGHVNSSA LSAEGCDSLA LSIAPNCHDP PASSNNEPAF
801: HGAPTTNTAS EGEHSQAPSA ATMDYTAPAP TTGEAVQFGP CNKPSAPVPE PGSNVAQAAD ILVALSTPRE KGK
101: AVMDDEPVLV DFLSMSLVNL QTRKQRSVAW YDDTGKGFFP SLFFDEEGDE TANLDSSNVE DGAQGIMLDK AVSSPEEVVK QVVLESGPPG PHKPSTADIL
201: RKKITSVERG SEDFLLVQDL FLSGMGPFAT PNNILHIHRY SPNDITAQCR LQAFEKQMSC TKEDRGDSNV RYGWLGSTKS DIVRILINGF GNTGKPAEKA
301: CLSAGVYLSP EDRAFTSVGL CDVDEKAVQY MLLCRVILGN MEAITPGSQD SFPSSEIYDS GVDDCSNPKC YVMWPSHLNT HIRLEYLVSF RLSPKVRNYL
401: LGLKGLWFHP SPKEVAMDIS TLQPIMGETG EAPTSPWISF RVLFAMIQDN ISSVAKELLF HHYEELKENE ISREEMVKKM IIIVGEKLLL ETLKKLHYCP
501: SLWHKSSVEV MSSDPARVAA EDPARTTEEY ISLDKTTGHC ALTLGNLGDS CGPNTLAESS TALSTKGCDT LAVATVPKSH DSVAPSSVPE TSTSSGGICL
601: ASPSVKPKSR DSPIRIMSPE SSANHGAKNQ DPSAARMAPT LHDVLRRTAS GKSASRGAEG SNGVAPSMRP HGYASPAPTN ASKGRGIGAP GLSLKGSECP
701: GPVLALGSTK FRGMKSPSSV PRMTPEGPEF LSLSIAPQSQ VIYPTKCHGG DLSSSVAAPA HVPGHVNSSA LSAEGCDSLA LSIAPNCHDP PASSNNEPAF
801: HGAPTTNTAS EGEHSQAPSA ATMDYTAPAP TTGEAVQFGP CNKPSAPVPE PGSNVAQAAD ILVALSTPRE KGK
001: MEAKIVKVLD SSRCEDGFGK KRKRAASYAA YVTGVSCAKL QNVPPPNGQC QIPDKRRRLE GENKLSAYEN RSGKALVRYY TYFKKTGIAK RVMMYENGEW
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNQGARGS GSANSVGSST
501: TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNQGARGS GSANSVGSST
501: TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL
Arabidopsis Description
RCD1Poly [ADP-ribose] polymerase [Source:UniProtKB/TrEMBL;Acc:M5BF30]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.