Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G402500.1 | Wheat | nucleus | 98.25 | 96.56 |
| TraesCS7B01G309100.1 | Wheat | nucleus | 97.67 | 96.1 |
| HORVU7Hr1G095570.3 | Barley | nucleus | 93.36 | 89.0 |
| EES15499 | Sorghum | nucleus | 66.55 | 63.16 |
| Os04t0672200-01 | Rice | extracellular | 68.07 | 60.9 |
| Zm00001d052295_P024 | Maize | cytosol | 64.8 | 59.02 |
| TraesCS4A01G059400.1 | Wheat | nucleus | 12.12 | 23.69 |
| TraesCS4A01G321300.1 | Wheat | nucleus | 15.15 | 22.85 |
| TraesCS1A01G195400.4 | Wheat | cytosol | 15.04 | 21.79 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G409200.2 | EnsemblPlantsGene:TraesCS7A01G409200 | Gene3D:3.90.228.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003950 |
| GO:GO:0016740 | InterPro:IPR012317 | InterPro:Poly(ADP-ribose)pol_cat_dom | InterPro:RST | PANTHER:PTHR32263 | PANTHER:PTHR32263:SF9 |
| PFAM:PF00644 | PFAM:PF12174 | PFscan:PS51059 | SEG:seg | SUPFAM:SSF56399 | MapMan:35.1 |
Description
No Description!
Coordinates
chr7A:+:596035838..596039817
Molecular Weight (calculated)
91851.0 Da
IEP (calculated)
6.664
GRAVY (calculated)
-0.288
Length
858 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPQESKPL CLKRKLVDNC LSKECKSRRV VVDNGPSDPS AKRCKCCCTR PNLASDCVNY LKSGVPSRIV FYKQDSWHNF PELIMKSLIE GFKGGKSSVV
101: AVMDDEPVLV DFLSMSLVNL QTRKQRSVAW YDDTGKGFFP SLFFDEEGDE TANLDSSNVE DGAQGIMLDK AVSSPEEVVK QVVLESGPPG PHKPSTADIL
201: RKKITSVERG SEDFLLVQDL FLSGMGPFAT PNNILHIHRY SPNDITAQCR LQAFEKQMSC TKEDRGDSNV RYGWLGSTKS DIVRILINGF GNTGKPAEKA
301: CLSAGVYLSP EDRAFTSVGL CDVDEKAVQY MLLCRVILGN MEAITPGSQD SFPSSEIYDS GVDDCSNPKC YVMWPSHLNT HIRLEYLVSF RLSPKVRNYL
401: LGLKGLWFHP SPKEVAMDIS TLQPIMGETG EAPTSPWISF RVLFAMIQDH ISSVAKELLF HHYEELKENE ISREEMVKKM IIIVGEKLLL ETLKKLHYCP
501: SLWHKSSVEV MSSDPARVAA EDPARTTEEH ISLDKTTGHC ALTLGNLGDS CGPNTLAESS TALSTKGCDT LAVATVPKSH DSVAPSSVPE TSTSSGAICL
601: ASPSVKPKSR DSPIRIMSPE SSANHGAKNQ DPSAARMAPT LHNVLLRTAS GKSASHGYAS PAPSNASKGR GISAPGLSLK GSECPGPVLA LGSTKFRGMK
701: SPSSVPRMTP EGPEFLSLSI APQSQAIYPT KCHGGDSISS VAAPAHVPGH VNSSALSAEG CDSLALSIAP NCHDPPASSN NEPALHGAPT THTASEGEHS
801: QAPSAATMGY TAPAPTTGEA VQFGSCNKPS APVPEPGSNV AQAADILVAL STPREKGK
101: AVMDDEPVLV DFLSMSLVNL QTRKQRSVAW YDDTGKGFFP SLFFDEEGDE TANLDSSNVE DGAQGIMLDK AVSSPEEVVK QVVLESGPPG PHKPSTADIL
201: RKKITSVERG SEDFLLVQDL FLSGMGPFAT PNNILHIHRY SPNDITAQCR LQAFEKQMSC TKEDRGDSNV RYGWLGSTKS DIVRILINGF GNTGKPAEKA
301: CLSAGVYLSP EDRAFTSVGL CDVDEKAVQY MLLCRVILGN MEAITPGSQD SFPSSEIYDS GVDDCSNPKC YVMWPSHLNT HIRLEYLVSF RLSPKVRNYL
401: LGLKGLWFHP SPKEVAMDIS TLQPIMGETG EAPTSPWISF RVLFAMIQDH ISSVAKELLF HHYEELKENE ISREEMVKKM IIIVGEKLLL ETLKKLHYCP
501: SLWHKSSVEV MSSDPARVAA EDPARTTEEH ISLDKTTGHC ALTLGNLGDS CGPNTLAESS TALSTKGCDT LAVATVPKSH DSVAPSSVPE TSTSSGAICL
601: ASPSVKPKSR DSPIRIMSPE SSANHGAKNQ DPSAARMAPT LHNVLLRTAS GKSASHGYAS PAPSNASKGR GISAPGLSLK GSECPGPVLA LGSTKFRGMK
701: SPSSVPRMTP EGPEFLSLSI APQSQAIYPT KCHGGDSISS VAAPAHVPGH VNSSALSAEG CDSLALSIAP NCHDPPASSN NEPALHGAPT THTASEGEHS
801: QAPSAATMGY TAPAPTTGEA VQFGSCNKPS APVPEPGSNV AQAADILVAL STPREKGK
001: MEAKIVKVLD SSRCEDGFGK KRKRAASYAA YVTGVSCAKL QNVPPPNGQC QIPDKRRRLE GENKLSAYEN RSGKALVRYY TYFKKTGIAK RVMMYENGEW
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNQGARGS GSANSVGSST
501: TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNQGARGS GSANSVGSST
501: TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL
Arabidopsis Description
RCD1Poly [ADP-ribose] polymerase [Source:UniProtKB/TrEMBL;Acc:M5BF30]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.