Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G309100.1 | Wheat | nucleus | 90.56 | 93.46 |
| TraesCS7A01G409200.2 | Wheat | nucleus | 89.0 | 93.36 |
| TraesCS7D01G402500.1 | Wheat | nucleus | 90.44 | 93.24 |
| EES15499 | Sorghum | nucleus | 62.56 | 62.28 |
| Os04t0672200-01 | Rice | extracellular | 64.44 | 60.48 |
| Zm00001d052295_P024 | Maize | cytosol | 61.33 | 58.6 |
| HORVU5Hr1G124010.1 | Barley | nucleus | 14.33 | 22.28 |
| HORVU1Hr1G050960.7 | Barley | nucleus | 15.0 | 22.17 |
| HORVU4Hr1G065800.1 | Barley | nucleus, plastid | 12.11 | 21.08 |
| HORVU0Hr1G014460.1 | Barley | nucleus | 11.78 | 18.37 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G095570.3 | EnsemblPlantsGene:HORVU7Hr1G095570 | Gene3D:3.90.228.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003950 |
| GO:GO:0016740 | InterPro:IPR012317 | InterPro:Poly(ADP-ribose)pol_cat_dom | InterPro:RST | PANTHER:PTHR32263 | PANTHER:PTHR32263:SF9 |
| PFAM:PF12174 | PFscan:PS51059 | SEG:seg | SUPFAM:SSF56399 | UniParc:UPI000B465DB5 | UniProt:A0A287XF08 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:583028039..583036114
Molecular Weight (calculated)
96601.8 Da
IEP (calculated)
6.144
GRAVY (calculated)
-0.223
Length
900 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPQESKPL CLKRKLADDC LSKECKSRRV VVDNGPSDPS SGKWCKCCCL RPNLASDCVN YLKSGVPSRI VFYKQDSWHD FPELIMKPLI EGFKGGKSSV
101: VDVMDDEAVL VDFLSMSLVN LKTRKQRSVA WYDDTGKGFF PSLSFDEEGD EMANLDSSNV EDGAQGIMLD KAVSSPEEVV KQVVLESGPP GPHKPSTADI
201: LRKKITSVER GSEDFLLVQD LFLSGMGPFA TPNNILHIHR YSPNDITAQC RLQAFEKQMS CTKEDRGDSN VRYGWLGSTK SDIVRILING FGNTGKPAEK
301: ASLSAGVYLS PEDRAFTRCV ILTRYFDHSI LSVNIFDHIS LFASVGLCDV DEKAVQYMLL CRVILGNMEA ITPGSQDSFP SSEIYDSGVD DCSNPKCYVM
401: WPSHLNTHIR LEYLVSFRLS SKVRNYLLGL KGLWFHPSPK EVAMDISTLQ PIMGETGEAP TSPWISFRVL FAMIQDNISS VAKELLFHHY EELKENEISR
501: EEMVKKMIII VGEKLLLETL KKLHYCPSLW YRSSVEVMSS DPARVAAEDP ARTIEEHISL DKTTGHCALT LGNLGNSCGP NTLAESSTAL STKECDTLAV
601: GMVTKSHDSV VPSGVPETST SSGAICLASP SVEPQSRDSP IRIMSPESSA NHGAKNQDPF AARMAPTHRN VLLRTSSGKS ASIGVEGSNG VAPSMRPHGD
701: ASLAPTNASK GHGIGAPGLS LKGSECPGPV LALGSTKFIG MKSPSSVPRM TPVGPEFLSL SIAPQSQVIY PTKSLGGDLT SCAGPPAHVP GHVNSSALSV
801: EGCDSLALSI APNSHDLPAS SNNEPAFHGA PTTHTSSVGE HSEAPSAATM GYTAPAPTTG EAVEFGPCNK PSAPVPEPGS NVAQAADILV ALSTPREKGK
101: VDVMDDEAVL VDFLSMSLVN LKTRKQRSVA WYDDTGKGFF PSLSFDEEGD EMANLDSSNV EDGAQGIMLD KAVSSPEEVV KQVVLESGPP GPHKPSTADI
201: LRKKITSVER GSEDFLLVQD LFLSGMGPFA TPNNILHIHR YSPNDITAQC RLQAFEKQMS CTKEDRGDSN VRYGWLGSTK SDIVRILING FGNTGKPAEK
301: ASLSAGVYLS PEDRAFTRCV ILTRYFDHSI LSVNIFDHIS LFASVGLCDV DEKAVQYMLL CRVILGNMEA ITPGSQDSFP SSEIYDSGVD DCSNPKCYVM
401: WPSHLNTHIR LEYLVSFRLS SKVRNYLLGL KGLWFHPSPK EVAMDISTLQ PIMGETGEAP TSPWISFRVL FAMIQDNISS VAKELLFHHY EELKENEISR
501: EEMVKKMIII VGEKLLLETL KKLHYCPSLW YRSSVEVMSS DPARVAAEDP ARTIEEHISL DKTTGHCALT LGNLGNSCGP NTLAESSTAL STKECDTLAV
601: GMVTKSHDSV VPSGVPETST SSGAICLASP SVEPQSRDSP IRIMSPESSA NHGAKNQDPF AARMAPTHRN VLLRTSSGKS ASIGVEGSNG VAPSMRPHGD
701: ASLAPTNASK GHGIGAPGLS LKGSECPGPV LALGSTKFIG MKSPSSVPRM TPVGPEFLSL SIAPQSQVIY PTKSLGGDLT SCAGPPAHVP GHVNSSALSV
801: EGCDSLALSI APNSHDLPAS SNNEPAFHGA PTTHTSSVGE HSEAPSAATM GYTAPAPTTG EAVEFGPCNK PSAPVPEPGS NVAQAADILV ALSTPREKGK
001: MEAKIVKVLD SSRCEDGFGK KRKRAASYAA YVTGVSCAKL QNVPPPNGQC QIPDKRRRLE GENKLSAYEN RSGKALVRYY TYFKKTGIAK RVMMYENGEW
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNQGARGS GSANSVGSST
501: TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNQGARGS GSANSVGSST
501: TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL
Arabidopsis Description
RCD1Poly [ADP-ribose] polymerase [Source:UniProtKB/TrEMBL;Acc:M5BF30]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.