Factsheet for VIT_00s0742g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g055210.2.1	Tomato	plastid	43.75	10.55
VIT_06s0004g06830.t01	Wine grape	cytosol	58.33	4.8
HORVU3Hr1G013910.4	Barley	cytosol	54.17	4.48
TraesCS3A01G077100.1	Wheat	cytosol	54.17	4.48
TraesCS3D01G077300.1	Wheat	cytosol	54.17	4.48
TraesCS5D01G159100.1	Wheat	cytosol	54.17	4.44
TraesCS5B01G152600.1	Wheat	cytosol	54.17	4.44
TraesCS5A01G153900.5	Wheat	cytosol	54.17	4.44
Zm00001d044608_P001	Maize	cytosol	54.17	4.29
GSMUA_Achr5P28200_001	Banana	cytosol	52.08	4.2
EES09082	Sorghum	cytosol	47.92	3.87
GSMUA_Achr9P04460_001	Banana	cytosol	45.83	3.87
Os03t0291500-01	Rice	plasma membrane	45.83	3.64
Zm00001d031563_P001	Maize	cytosol	10.42	2.78
Zm00001d010355_P001	Maize	mitochondrion	10.42	2.23
Zm00001d028766_P001	Maize	endoplasmic reticulum	12.5	1.97
HORVU5Hr1G048100.9	Barley	mitochondrion, plastid	22.92	1.83

Protein Annotations

MapMan:35.2	ProteinID:CCB50183	ProteinID:CCB50183.1	UniProt:F6HD88	EMBL:FN595564	GO:GO:0003674
GO:GO:0003735	GO:GO:0003824	GO:GO:0004066	GO:GO:0005198	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0006529	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009646
GO:GO:0009987	GO:GO:0019538	GO:GO:0042803	PANTHER:PTHR11772	PANTHER:PTHR11772:SF13	UniParc:UPI000210AA02
ArrayExpress:VIT_00s0742g00040	EnsemblPlantsGene:VIT_00s0742g00040	EnsemblPlants:VIT_00s0742g00040.t01	:	:	:

Description

No Description!

Coordinates

chrUn:+:34922426..34923457

Molecular Weight (calculated)

5470.6 Da

IEP (calculated)

10.466

GRAVY (calculated)

-0.656

Length

48 amino acids

Sequence
(BLAST)

1: MCGILAVLGC VDNSQAKRSR IIELSRRKGK RGRYSFSHKV YAQAEKEE

Best Arabidopsis Sequence Match ( AT5G10240.2 )
(BLAST)

001: MCGILAVLGC VDNSQAKRSR IIELSRRLRH RGPDWSGLHC YEDCYLAHER LAIVDPTSGD QPLYNEDKTI AVTVNGEIYN HKALRENLKS HQFRTGSDCE
101: VIAHLVKHGE EFVDMLDGMF AFVLLDTRDK SFIAARDAIG ITPLYIGWGL DGSVWFASEM KALSDDCEQF MCFPPGHIYS SKQGGLRRWY NPPWFSEVVP
201: STPYDPLVVR NTFEKAVIKR LMTDVPFGVL LSGGLDSSLV ASVALRHLEK SEAACQWGSK LHTFCIGLKG SPDLKAGREV ADYLGTRHHE LHFTVQDGID
301: AIEEVIYHVE TYDVTTIRAS TPMFLMSRKI KSLGVKMVLS GEGSDEIFGG YLYFHKAPNK KEFHEETCRK IKALHQYDCL RANKSTSAWG VEARVPFLDK
401: EFINVAMSID PEWKMIRPDL GRIEKWVLRN AFDDEKNPYL PKHILYRQKE QFSDGVGYSW IDGLKDHANK HVSETMLMNA SFVFPDNTPL TKEAYYYRTI
501: FEKFFPKSAA RATVPGGPSV ACSTAKAVEW DAAWSQNLDP SGRAALGVHV SAYGEDKTED SRPEKLQKLA EKTPAIV

Arabidopsis Description

ASN3Asparagine synthetase [glutamine-hydrolyzing] 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.