Factsheet for GSMUA_Achr5P28200_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 5
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P04460_001	Banana	cytosol	82.86	86.64
TraesCS3A01G077100.1	Wheat	cytosol	82.35	84.34
HORVU3Hr1G013910.4	Barley	cytosol	82.18	84.17
TraesCS5A01G153900.5	Wheat	cytosol	82.69	83.96
TraesCS5B01G152600.1	Wheat	cytosol	82.35	83.76
TraesCS5D01G159100.1	Wheat	cytosol	82.18	83.59
Zm00001d031563_P001	Maize	cytosol	25.21	83.33
TraesCS3D01G077300.1	Wheat	cytosol	81.18	83.13
VIT_06s0004g06830.t01	Wine grape	cytosol	80.84	82.5
Zm00001d010355_P001	Maize	mitochondrion	30.92	82.14
KRH72702	Soybean	cytosol, endoplasmic reticulum	80.17	81.96
KRH17053	Soybean	cytosol, endoplasmic reticulum, mitochondrion	79.83	81.76
PGSC0003DMT400010685	Potato	cytosol	80.5	81.19
KRH30252	Soybean	cytosol	78.49	80.66
Solyc06g007180.2.1	Tomato	cytosol, plastid	79.83	80.51
KRG98262	Soybean	cytosol	78.32	80.48
KRH30266	Soybean	endoplasmic reticulum	78.32	80.48
AT3G47340.1	Thale cress	cytosol	78.15	79.62
CDY71298	Canola	cytosol	72.77	78.02
Bra018160.1-P	Field mustard	cytosol	76.81	77.99
Zm00001d044608_P001	Maize	cytosol	79.16	77.72
CDX99060	Canola	cytosol	76.3	77.61
Bra019500.1-P	Field mustard	cytosol	76.47	76.86
CDY21785	Canola	cytosol	76.3	76.82
CDX77846	Canola	cytosol	76.13	76.52
EES09082	Sorghum	cytosol	75.29	75.42
Zm00001d028766_P001	Maize	endoplasmic reticulum	37.82	73.77
CDY51796	Canola	cytosol	27.56	72.89
HORVU5Hr1G048100.9	Barley	mitochondrion, plastid	72.94	72.33
GSMUA_Achr9P15390_001	Banana	cytosol, mitochondrion	75.13	70.62
Os03t0291500-01	Rice	plasma membrane	68.57	67.55
Solyc04g055210.2.1	Tomato	plastid	20.34	60.8
VIT_00s0742g00040.t01	Wine grape	nucleus	4.2	52.08

Protein Annotations

KEGG:00250+6.3.5.4	Gene3D:3.40.50.620	Gene3D:3.60.20.10	MapMan:4.1.2.1.1	InterPro:AsnB_N	InterPro:Asn_synth_AEB
InterPro:Asn_synthase	InterPro:GATase_2_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004066
GO:GO:0005488	GO:GO:0005524	GO:GO:0006529	GO:GO:0006541	GO:GO:0008150	GO:GO:0008152
GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr5G28200_001	EnsemblPlants:GSMUA_Achr5P28200_001	EnsemblPlants:GSMUA_Achr5T28200_001
InterPro:IPR014729	InterPro:IPR017932	InterPro:IPR029055	UniProt:M0T2E4	InterPro:Ntn_hydrolases_N	PFAM:PF00733
PFAM:PF13537	PIRSF:PIRSF001589	PFscan:PS51278	PANTHER:PTHR11772	PANTHER:PTHR11772:SF13	InterPro:Rossmann-like_a/b/a_fold
SUPFAM:SSF52402	SUPFAM:SSF56235	UniParc:UPI000295EC14	SEG:seg	:	:

Description

Asparagine synthetase [glutamine-hydrolyzing] [Source:GMGC_GENE;Acc:GSMUA_Achr5G28200_001]

Coordinates

chr5:+:28499940..28503694

Molecular Weight (calculated)

66601.2 Da

IEP (calculated)

6.677

GRAVY (calculated)

-0.311

Length

595 amino acids

Sequence
(BLAST)

001: MCGILAVLGC SDESQAKRVR GSRFLLVSTR TLKHRGPDWS GLHQYGDCYL THQRLAIVDP ASGDQPLYNE DKSIVVTVNG EIYNHEELRK RFPHHKFRTG
101: SDCEVIAHLY EEHGEGFVDM LDGIFSFVLL DTRDNSFIAA RDAIGVTPLY IGWGLDGSVW ISSEMKGLND DCEHFEVFPP GHLYSSKEGS YKRWYNPPWY
201: SEAIPSVPYD PLVLREAFEK AVIKRLMTDV PFGVLLSGGL DSSLVAAVTS RHLAGTKAAE QWGTQLHSFC VGLEGSPDLK AAKEVADYLG TVHHEFHFTV
301: QDGIDAIEDV IYHIETYDVT TIRASTPMFL MSRKIKALGV KMVISGEGSD ELFGGYLYFH KAPNKEEFHG ETCRKVKALH QYDCLRANKA TSAWGLESRV
401: PFLDKAFIGV AMSIDPEWKM IKPDLGRIEK WVLRKAFDDE ENPYLPKHIL YRQKEQFSDG VGYSWIDGLK SHAAEHVSGK MMQNAKHIYP HNTPTTKEAY
501: YYRMIFERFF PQNSARLTIP GGPSVACSTA KAIEWDAQWS KNLDPSGRAA LGVHVSAYDP AAVPSSLTTG TSSAMLVNKK QRVMEAKAPE LTISS

Best Arabidopsis Sequence Match ( AT3G47340.1 )
(BLAST)

001: MCGILAVLGC SDDSQAKRVR VLELSRRLRH RGPDWSGLYQ NGDNYLAHQR LAVIDPASGD QPLFNEDKTI VVTVNGEIYN HEELRKRLKN HKFRTGSDCE
101: VIAHLYEEYG VDFVDMLDGI FSFVLLDTRD NSFMVARDAI GVTSLYIGWG LDGSVWISSE MKGLNDDCEH FETFPPGHFY SSKLGGFKQW YNPPWFNESV
201: PSTPYEPLAI RRAFENAVIK RLMTDVPFGV LLSGGLDSSL VASITARHLA GTKAAKQWGP QLHSFCVGLE GSPDLKAGKE VAEYLGTVHH EFHFSVQDGI
301: DAIEDVIYHV ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGADEIFG GYLYFHKAPN KKEFHQETCR KIKALHKYDC LRANKSTSAF GLEARVPFLD
401: KDFINTAMSL DPESKMIKPE EGRIEKWVLR RAFDDEERPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAA QNVNDKMMSN AGHIFPHNTP NTKEAYYYRM
501: IFERFFPQNS ARLTVPGGAT VACSTAKAVE WDASWSNNMD PSGRAAIGVH LSAYDGKNVA LTIPPLKAID NMPMMMGQGV VIQS

Arabidopsis Description

ASN1DIN6 [Source:UniProtKB/TrEMBL;Acc:A0A178VBT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.