CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 5
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30252	Soybean	cytosol	99.83	99.83
KRG98262	Soybean	cytosol	98.27	98.27
KRH17053	Soybean	cytosol, endoplasmic reticulum, mitochondrion	87.91	87.61
KRH72702	Soybean	cytosol, endoplasmic reticulum	87.05	86.6
VIT_06s0004g06830.t01	Wine grape	cytosol	85.66	85.08
Solyc06g007180.2.1	Tomato	cytosol, plastid	84.28	82.71
PGSC0003DMT400010685	Potato	cytosol	83.94	82.37
AT3G47340.1	Thale cress	cytosol	82.04	81.34
Bra018160.1-P	Field mustard	cytosol	82.04	81.06
CDY71298	Canola	cytosol	76.86	80.18
Zm00001d031563_P001	Maize	cytosol	24.87	80.0
CDX99060	Canola	cytosol	80.66	79.83
TraesCS5A01G153900.5	Wheat	cytosol	80.66	79.69
Bra019500.1-P	Field mustard	cytosol	81.35	79.56
CDY21785	Canola	cytosol	81.17	79.53
TraesCS5D01G159100.1	Wheat	cytosol	80.31	79.49
TraesCS5B01G152600.1	Wheat	cytosol	80.31	79.49
CDY51796	Canola	cytosol	30.74	79.11
Zm00001d010355_P001	Maize	mitochondrion	30.57	79.02
CDX77846	Canola	cytosol	80.48	78.72
TraesCS3D01G077300.1	Wheat	cytosol	78.93	78.66
GSMUA_Achr5P28200_001	Banana	cytosol	80.48	78.32
HORVU3Hr1G013910.4	Barley	cytosol	78.24	77.97
TraesCS3A01G077100.1	Wheat	cytosol	77.89	77.62
GSMUA_Achr9P04460_001	Banana	cytosol	75.99	77.33
KRH31291	Soybean	cytosol, nucleus	74.27	75.97
KRG97578	Soybean	cytosol	74.44	75.75
Zm00001d044608_P001	Maize	cytosol	77.37	73.93
EES09082	Sorghum	cytosol	74.44	72.56
HORVU5Hr1G048100.9	Barley	mitochondrion, plastid	73.58	71.0
Zm00001d028766_P001	Maize	endoplasmic reticulum	36.1	68.52
Os03t0291500-01	Rice	plasma membrane	68.22	65.4

Protein Annotations

KEGG:00250+6.3.5.4	EntrezGene:100798318	Gene3D:3.40.50.620	Gene3D:3.60.20.10	MapMan:4.1.2.1.1	EMBL:ACUP02006943
InterPro:AsnB_N	InterPro:Asn_synth_AEB	InterPro:Asn_synthase	InterPro:GATase_2_dom	EnsemblPlantsGene:GLYMA_11G171400	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004066	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006529	GO:GO:0006541	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009628	GO:GO:0009646	GO:GO:0009987	GO:GO:0042803	UniProt:I1LLM2	InterPro:IPR014729
InterPro:IPR017932	InterPro:IPR029055	EnsemblPlants:KRH30266	ProteinID:KRH30266	ProteinID:KRH30266.1	InterPro:Ntn_hydrolases_N
PFAM:PF00733	PFAM:PF13537	PIRSF:PIRSF001589	PFscan:PS51278	PANTHER:PTHR11772	PANTHER:PTHR11772:SF13
InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF56235	TIGRFAMs:TIGR01536	UniParc:UPI0001950DED	SEG:seg

Description

hypothetical protein

Coordinates

chr11:-:18518857..18523733

Molecular Weight (calculated)

65262.6 Da

IEP (calculated)

6.619

GRAVY (calculated)

-0.297

Length

579 amino acids

Sequence
(BLAST)

001: MCGILAVLGC SDSSQAKRVR VLELSRRLKH RGPDWSGLHQ YGDNYLAHQR LAIVDPASGD QPLFNEDKTV VVTVNGEIYN HEELRKQLPN HTFRTGSDCD
101: VIAHLYEEHG ENFVDMLDGI FSFVLLDTRD NSFIVARDAI GVTSLYIGWG LDGSVWISSE LKGLNDDCEH FESFPPGHLY SSKERAFRRW YNPPWFSEAI
201: PSAPYDPLAL RHAFEKAVVK RLMTDVPFGV LLSGGLDSSL VAAVTARYLA GTNAAKQWGT KLHSFCVGLE GAPDLKAAKE VADYIGTVHH EFHYTVQDGI
301: DAIEDVIYHI ETYDVTTIRA SIPMFLMSRK IKSLGVKWVI SGEGSDEIFG GYLYFHKAPN KEEFHQETCR KIKALHKYDC LRANKSTFAW GLEARVPFLD
401: KDFIRVAMNI DPDYKMIKKE EGRIEKWVLR RAFDDEEHPY LPKHILYRQK EQFSDGVGYG WIDGLKAHAE KHVTDRMMLN AANIFPFNTP TTKEAYYYRM
501: IFERFFPQNS ARLSVPGGPS VACSTAKAVE WDAAWSNNLD PSGRAALGVH ASAYGNQVKA VEPEKIIPKM EVSPLGVAI

Best Arabidopsis Sequence Match ( AT3G47340.1 )
(BLAST)

001: MCGILAVLGC SDDSQAKRVR VLELSRRLRH RGPDWSGLYQ NGDNYLAHQR LAVIDPASGD QPLFNEDKTI VVTVNGEIYN HEELRKRLKN HKFRTGSDCE
101: VIAHLYEEYG VDFVDMLDGI FSFVLLDTRD NSFMVARDAI GVTSLYIGWG LDGSVWISSE MKGLNDDCEH FETFPPGHFY SSKLGGFKQW YNPPWFNESV
201: PSTPYEPLAI RRAFENAVIK RLMTDVPFGV LLSGGLDSSL VASITARHLA GTKAAKQWGP QLHSFCVGLE GSPDLKAGKE VAEYLGTVHH EFHFSVQDGI
301: DAIEDVIYHV ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGADEIFG GYLYFHKAPN KKEFHQETCR KIKALHKYDC LRANKSTSAF GLEARVPFLD
401: KDFINTAMSL DPESKMIKPE EGRIEKWVLR RAFDDEERPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAA QNVNDKMMSN AGHIFPHNTP NTKEAYYYRM
501: IFERFFPQNS ARLTVPGGAT VACSTAKAVE WDASWSNNMD PSGRAAIGVH LSAYDGKNVA LTIPPLKAID NMPMMMGQGV VIQS

Arabidopsis Description

ASN1DIN6 [Source:UniProtKB/TrEMBL;Acc:A0A178VBT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.