CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31291	Soybean	cytosol, nucleus	94.73	95.23
Solyc04g055200.2.1	Tomato	cytosol	60.28	85.96
AT5G10240.1	Thale cress	cytosol	85.94	84.6
Bra024345.1-P	Field mustard	cytosol	83.3	83.89
CDY08829	Canola	cytosol	83.3	83.89
AT5G65010.2	Thale cress	cytosol	85.06	83.59
CDY14529	Canola	cytosol	82.95	83.54
TraesCS1D01G430300.1	Wheat	cytosol, mitochondrion	76.8	82.61
TraesCS1A01G382800.1	Wheat	cytosol, mitochondrion	84.18	81.6
Bra006053.1-P	Field mustard	mitochondrion, plastid	82.95	81.38
TraesCS1B01G408200.1	Wheat	cytosol, plastid	83.83	81.26
Os06t0265000-01	Rice	cytosol	84.36	81.22
CDX81165	Canola	plastid	82.78	81.21
CDX78372	Canola	plastid	82.78	81.21
TraesCS1B01G453600.1	Wheat	cytosol, plastid	83.66	80.81
TraesCS1D01G390500.1	Wheat	cytosol, plastid	83.66	80.54
TraesCS1A01G422100.1	Wheat	cytosol, mitochondrion	83.3	80.48
EER89574	Sorghum	cytosol	83.48	80.37
Zm00001d045675_P003	Maize	extracellular	82.6	79.53
GSMUA_Achr9P15390_001	Banana	cytosol, mitochondrion	84.18	75.67
HORVU1Hr1G092110.4	Barley	cytosol, plastid	83.66	74.84
KRH17053	Soybean	cytosol, endoplasmic reticulum, mitochondrion	76.27	74.7
KRG98262	Soybean	cytosol	75.92	74.61
KRH30252	Soybean	cytosol	75.92	74.61
KRH72702	Soybean	cytosol, endoplasmic reticulum	76.27	74.57
KRH30266	Soybean	endoplasmic reticulum	75.75	74.44
HORVU1Hr1G084370.2	Barley	plastid	84.01	72.75
CDY23169	Canola	mitochondrion	8.79	53.19
CDY54341	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.83	52.14
CDY50475	Canola	cytosol	12.83	52.14
CDY01568	Canola	cytosol	12.83	52.14
CDY01480	Canola	cytosol	12.83	52.14
CDX87183	Canola	cytosol	12.65	51.43
CDY17904	Canola	cytosol	12.65	50.7
CDX86918	Canola	cytosol, mitochondrion	8.79	37.31

Protein Annotations

KEGG:00250+6.3.5.4	Gene3D:3.40.50.620	Gene3D:3.60.20.10	MapMan:4.1.2.1.1	EntrezGene:732660	EMBL:ACUP02010800
EMBL:AM158274	InterPro:AsnB_N	InterPro:Asn_synth_AEB	InterPro:Asn_synthase	InterPro:GATase_2_dom	EnsemblPlantsGene:GLYMA_18G017200
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004066	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006529	GO:GO:0006541	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009628	GO:GO:0009646	GO:GO:0009987	GO:GO:0016874	GO:GO:0042803
InterPro:IPR014729	InterPro:IPR017932	InterPro:IPR029055	EnsemblPlants:KRG97578	ProteinID:KRG97578	ProteinID:KRG97578.1
InterPro:Ntn_hydrolases_N	PFAM:PF00733	PFAM:PF13537	PIRSF:PIRSF001589	PFscan:PS51278	PANTHER:PTHR11772
PANTHER:PTHR11772:SF13	UniProt:Q14SM9	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF56235	UniParc:UPI0000DA5BC8
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:1223455..1229857

Molecular Weight (calculated)

64277.4 Da

IEP (calculated)

6.469

GRAVY (calculated)

-0.360

Length

569 amino acids

Sequence
(BLAST)

001: MCGILAVLGC VDNSQTKRAR IIELSRRLRH RGPDWSGIHC YEDCYLAHQR LAIVDPTSGD QPLYNEDKTV IVTVNGEIYN HKQLRQKLSS HQFRTGSDCE
101: VIAHLYEEHG EEFVNMLDGM FAFILLDTRD KSFIAARDAI GITPLYLGWG HDGSTWFASE MKALSDDCER FISFPPGHIY SSKQGGLRRW YNPPWFSEDI
201: PSTPYDPTLL RETFERAVVK RMMTDVPFGV LLSGGLDSSL VAAVVNRYLA ESESARQWGS QLHTFCIGLK GSPDLKAAKE VADYLGTRHH ELYFTVQEGI
301: DALEEVIYHI ETYDVTTIRA STAMFLMSRK IKALGVKMVL SGEGSDEIFG GYLYFHKAPN KKEFHEETCR KIKALHLYDC LRANKSTAAW GVEARVPFLD
401: KEFINVAMSI DPEWKMIRPD LGRIEKWVLR NAFDDDKNPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAN KQVTDATMMA ANFIYPENTP TTKEGYLYRT
501: IFEKFFPKNA AKATVPGGPS VACSTAKAVE WDAAWSKNLD PSGRAALGIH DAAYDAVDTK IDEPKNGTL

Best Arabidopsis Sequence Match ( AT5G10240.1 )
(BLAST)

001: MCGILAVLGC VDNSQAKRSR IIELSRRLRH RGPDWSGLHC YEDCYLAHER LAIVDPTSGD QPLYNEDKTI AVTVNGEIYN HKALRENLKS HQFRTGSDCE
101: VIAHLYEEHG EEFVDMLDGM FAFVLLDTRD KSFIAARDAI GITPLYIGWG LDGSVWFASE MKALSDDCEQ FMCFPPGHIY SSKQGGLRRW YNPPWFSEVV
201: PSTPYDPLVV RNTFEKAVIK RLMTDVPFGV LLSGGLDSSL VASVALRHLE KSEAACQWGS KLHTFCIGLK GSPDLKAGRE VADYLGTRHH ELHFTVQDGI
301: DAIEEVIYHV ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGSDEIFG GYLYFHKAPN KKEFHEETCR KIKALHQYDC LRANKSTSAW GVEARVPFLD
401: KEFINVAMSI DPEWKMIRPD LGRIEKWVLR NAFDDEKNPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAN KHVSETMLMN ASFVFPDNTP LTKEAYYYRT
501: IFEKFFPKSA ARATVPGGPS VACSTAKAVE WDAAWSQNLD PSGRAALGVH VSAYGEDKTE DSRPEKLQKL AEKTPAIV

Arabidopsis Description

ASN3Asparagine synthetase [glutamine-hydrolyzing] 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.