Factsheet for TraesCS1D01G390500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G382800.1	Wheat	cytosol, mitochondrion	94.08	94.72
TraesCS1B01G408200.1	Wheat	cytosol, plastid	93.74	94.38
TraesCS1D01G430300.1	Wheat	cytosol, mitochondrion	84.26	94.14
Os06t0265000-01	Rice	cytosol	89.51	89.51
HORVU1Hr1G084370.2	Barley	plastid	97.63	87.82
EER89574	Sorghum	cytosol	87.48	87.48
Zm00001d045675_P003	Maize	extracellular	86.63	86.63
Solyc04g055200.2.1	Tomato	cytosol	57.02	84.46
KRH31291	Soybean	cytosol, nucleus	80.71	84.28
KRG97578	Soybean	cytosol	80.54	83.66
Bra024345.1-P	Field mustard	cytosol	79.86	83.54
CDY08829	Canola	cytosol	79.86	83.54
CDY14529	Canola	cytosol	79.86	83.54
AT5G10240.1	Thale cress	cytosol	81.22	83.05
AT5G65010.2	Thale cress	cytosol	80.2	81.87
Bra006053.1-P	Field mustard	mitochondrion, plastid	80.03	81.55
CDX78372	Canola	plastid	79.86	81.38
CDX81165	Canola	plastid	79.7	81.21
GSMUA_Achr9P15390_001	Banana	cytosol, mitochondrion	83.42	77.88
TraesCS5D01G159100.1	Wheat	cytosol	74.11	74.87
TraesCS3D01G077300.1	Wheat	cytosol	73.43	74.7
TraesCS4D01G195100.1	Wheat	mitochondrion, plastid	66.5	66.61
CDY23169	Canola	mitochondrion	8.97	56.38
CDX87183	Canola	cytosol	12.52	52.86
CDY54341	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.35	52.14
CDY50475	Canola	cytosol	12.35	52.14
CDY01568	Canola	cytosol	12.35	52.14
CDY01480	Canola	cytosol	12.35	52.14
CDY17904	Canola	cytosol	12.18	50.7
CDX86918	Canola	cytosol, mitochondrion	8.97	39.55

Protein Annotations

KEGG:00250+6.3.5.4	Gene3D:3.40.50.620	Gene3D:3.60.20.10	MapMan:4.1.2.1.1	InterPro:AsnB_N	InterPro:Asn_synth_AEB
InterPro:Asn_synthase	InterPro:GATase_2_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004066	GO:GO:0006529
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR014729	InterPro:IPR017932
InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00733	PFAM:PF13537	PIRSF:PIRSF001589	PFscan:PS51278
PANTHER:PTHR11772	PANTHER:PTHR11772:SF13	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF56235	EnsemblPlantsGene:TraesCS1D01G390500
EnsemblPlants:TraesCS1D01G390500.1	TIGR:cd00712	TIGR:cd01991	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:+:461902221..461908035

Molecular Weight (calculated)

66240.0 Da

IEP (calculated)

6.546

GRAVY (calculated)

-0.265

Length

591 amino acids

Sequence
(BLAST)

001: MCGILAVLGV GDVSLAKRSR IIELSRRLRH RGPDWSGIHS FEDCYLAHQR LAIVDPTSGD QPLYNEDKTV VVTVNGEIYN HEELKAKLKH HKFQTGSDCE
101: VIAHLYEEYG EEFVDMLDGM FSFVLLDTRD KSFIAARDAI GICPLYMGWG LDGSVWFSSE MKALSDDCER FISFPPGHLY SSKTGGLRRW YNPPWFSESI
201: PSAPYDPLLI RESFEKAVIK RLMTDVPFGV LLSGGLDSSL VASVVSRHLA ETKVARQWGN KLHTFCIGLK GSPDLKAAKE VADYLGTVHH ELHFTVQEGI
301: DALEEVIYHI ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGSDEIFG GYLYFHKAPN KKELHEETCR KIKALHLYDC LRANKATSAW GLEARVPFLD
401: KNFINVAMDL DPECKMIRRD LGRIEKWVLR NAFDDEKKPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAN AHVSDSMMTN ASFVYPENTP TTKEAYYYRT
501: VFEKFYPKNA ARLTVPGGPS VACSTAKAVE WDAAWSKLLD PSGRAALGVH DAAYEEEKAP ASVDPVLENA FHPPAHGEST LVKSAVPAAA V

Best Arabidopsis Sequence Match ( AT5G10240.1 )
(BLAST)

001: MCGILAVLGC VDNSQAKRSR IIELSRRLRH RGPDWSGLHC YEDCYLAHER LAIVDPTSGD QPLYNEDKTI AVTVNGEIYN HKALRENLKS HQFRTGSDCE
101: VIAHLYEEHG EEFVDMLDGM FAFVLLDTRD KSFIAARDAI GITPLYIGWG LDGSVWFASE MKALSDDCEQ FMCFPPGHIY SSKQGGLRRW YNPPWFSEVV
201: PSTPYDPLVV RNTFEKAVIK RLMTDVPFGV LLSGGLDSSL VASVALRHLE KSEAACQWGS KLHTFCIGLK GSPDLKAGRE VADYLGTRHH ELHFTVQDGI
301: DAIEEVIYHV ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGSDEIFG GYLYFHKAPN KKEFHEETCR KIKALHQYDC LRANKSTSAW GVEARVPFLD
401: KEFINVAMSI DPEWKMIRPD LGRIEKWVLR NAFDDEKNPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAN KHVSETMLMN ASFVFPDNTP LTKEAYYYRT
501: IFEKFFPKSA ARATVPGGPS VACSTAKAVE WDAAWSQNLD PSGRAALGVH VSAYGEDKTE DSRPEKLQKL AEKTPAIV

Arabidopsis Description

ASN3Asparagine synthetase [glutamine-hydrolyzing] 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.