CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01568	Canola	cytosol	97.14	97.14
CDY54341	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	96.43	96.43
CDY01480	Canola	cytosol	95.71	95.71
CDX87183	Canola	cytosol	95.0	95.0
CDY17904	Canola	cytosol	94.29	92.96
CDX86918	Canola	cytosol, mitochondrion	63.57	66.42
CDY23169	Canola	mitochondrion	42.86	63.83
Solyc04g055200.2.1	Tomato	cytosol	48.57	17.04
AT5G10240.1	Thale cress	cytosol	62.86	15.22
CDX81165	Canola	plastid	62.14	15.0
CDX78372	Canola	plastid	60.71	14.66
CDY08829	Canola	cytosol	55.0	13.63
CDY14529	Canola	cytosol	54.29	13.45
TraesCS1A01G382800.1	Wheat	cytosol, mitochondrion	54.29	12.95
KRG97578	Soybean	cytosol	52.14	12.83
TraesCS1B01G408200.1	Wheat	cytosol, plastid	53.57	12.78
TraesCS1B01G453600.1	Wheat	cytosol, plastid	52.86	12.56
KRH31291	Soybean	cytosol, nucleus	50.71	12.54
TraesCS1D01G390500.1	Wheat	cytosol, plastid	52.14	12.35
TraesCS1A01G422100.1	Wheat	cytosol, mitochondrion	51.43	12.22
CDY71298	Canola	cytosol	47.14	11.89
Zm00001d045675_P003	Maize	extracellular	50.0	11.84
Os06t0265000-01	Rice	cytosol	50.0	11.84
EER89574	Sorghum	cytosol	50.0	11.84
GSMUA_Achr9P15390_001	Banana	cytosol, mitochondrion	52.14	11.53
CDX99060	Canola	cytosol	47.86	11.45
HORVU1Hr1G092110.4	Barley	cytosol, plastid	50.71	11.16
CDX77846	Canola	cytosol	45.71	10.81
CDY21785	Canola	cytosol	45.0	10.66
HORVU1Hr1G084370.2	Barley	plastid	50.0	10.65
TraesCS1D01G430300.1	Wheat	cytosol, mitochondrion	21.43	5.67
CDY51796	Canola	cytosol	4.29	2.67

Protein Annotations

EnsemblPlants:CDY50475	EnsemblPlantsGene:GSBRNA2T00096780001	PANTHER:PTHR11772	PANTHER:PTHR11772:SF13	ProteinID:CDY50475	ProteinID:CDY50475.1
UniParc:UPI0004EEF534	UniProt:A0A078IHN3	MapMan:35.1	:	:	:

Description

BnaA10g29020DBnaA10g29020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHN3]

Coordinates

chrLK032914:+:96865..97779

Molecular Weight (calculated)

15884.9 Da

IEP (calculated)

6.270

GRAVY (calculated)

-0.397

Length

140 amino acids

Sequence
(BLAST)

001: MRHFHLRFVP IRLVEDYLDT NQRIEDLFLG LSDGPLLSLR FRWTIRPDIE RIEKWVLRIA FDDEKNPYLP KSAARATVPG GPSVPCSTAK AVEWDAAWSQ
101: NLDLSGRAAL GVHVAAYEED KAEDTRPKKL QAEKTAEGIV

Best Arabidopsis Sequence Match ( AT5G10240.1 )
(BLAST)

001: MCGILAVLGC VDNSQAKRSR IIELSRRLRH RGPDWSGLHC YEDCYLAHER LAIVDPTSGD QPLYNEDKTI AVTVNGEIYN HKALRENLKS HQFRTGSDCE
101: VIAHLYEEHG EEFVDMLDGM FAFVLLDTRD KSFIAARDAI GITPLYIGWG LDGSVWFASE MKALSDDCEQ FMCFPPGHIY SSKQGGLRRW YNPPWFSEVV
201: PSTPYDPLVV RNTFEKAVIK RLMTDVPFGV LLSGGLDSSL VASVALRHLE KSEAACQWGS KLHTFCIGLK GSPDLKAGRE VADYLGTRHH ELHFTVQDGI
301: DAIEEVIYHV ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGSDEIFG GYLYFHKAPN KKEFHEETCR KIKALHQYDC LRANKSTSAW GVEARVPFLD
401: KEFINVAMSI DPEWKMIRPD LGRIEKWVLR NAFDDEKNPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAN KHVSETMLMN ASFVFPDNTP LTKEAYYYRT
501: IFEKFFPKSA ARATVPGGPS VACSTAKAVE WDAAWSQNLD PSGRAALGVH VSAYGEDKTE DSRPEKLQKL AEKTPAIV

Arabidopsis Description

ASN3Asparagine synthetase [glutamine-hydrolyzing] 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.