CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01568	Canola	cytosol	66.42	63.57
CDY50475	Canola	cytosol	66.42	63.57
CDY54341	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.67	62.86
CDX87183	Canola	cytosol	64.93	62.14
CDY01480	Canola	cytosol	64.93	62.14
CDY17904	Canola	cytosol	63.43	59.86
CDY23169	Canola	mitochondrion	38.81	55.32
Solyc04g055200.2.1	Tomato	cytosol	36.57	12.28
CDY08829	Canola	cytosol	42.54	10.09
CDY14529	Canola	cytosol	42.54	10.09
AT5G10240.1	Thale cress	cytosol	43.28	10.03
CDX78372	Canola	plastid	42.54	9.83
CDX81165	Canola	plastid	42.54	9.83
TraesCS1D01G390500.1	Wheat	cytosol, plastid	39.55	8.97
TraesCS1B01G408200.1	Wheat	cytosol, plastid	38.81	8.86
Os06t0265000-01	Rice	cytosol	38.81	8.8
KRG97578	Soybean	cytosol	37.31	8.79
TraesCS1A01G382800.1	Wheat	cytosol, mitochondrion	38.06	8.69
Zm00001d045675_P003	Maize	extracellular	38.06	8.63
TraesCS1B01G453600.1	Wheat	cytosol, plastid	37.31	8.49
KRH31291	Soybean	cytosol, nucleus	35.82	8.48
EER89574	Sorghum	cytosol	37.31	8.46
TraesCS1A01G422100.1	Wheat	cytosol, mitochondrion	36.57	8.32
CDY71298	Canola	cytosol	34.33	8.29
GSMUA_Achr9P15390_001	Banana	cytosol, mitochondrion	38.81	8.21
CDX99060	Canola	cytosol	35.07	8.03
HORVU1Hr1G084370.2	Barley	plastid	38.81	7.91
HORVU1Hr1G092110.4	Barley	cytosol, plastid	37.31	7.86
CDX77846	Canola	cytosol	33.58	7.6
CDY21785	Canola	cytosol	32.84	7.45
CDY51796	Canola	cytosol	4.48	2.67
TraesCS1D01G430300.1	Wheat	cytosol, mitochondrion	7.46	1.89

Protein Annotations

EnsemblPlants:CDX86918

EnsemblPlantsGene:GSBRNA2T00145718001

ProteinID:CDX86918

ProteinID:CDX86918.1

UniParc:UPI0004EDF67A

MapMan:35.1

Description

BnaC03g51880D

Coordinates

chrLK031848:-:351600..352529

Molecular Weight (calculated)

15311.2 Da

IEP (calculated)

9.018

GRAVY (calculated)

-0.213

Length

134 amino acids

Sequence
(BLAST)

001: MRHYHLRFVP IRLVEYYLDT NQRIGDLLLS FSDGPLLSLR FHRTVFFSHY RFHRTVPSQF DSAARATVPG GPSVPCSTAK AVEWDAAWSQ NLDLSGRAAL
101: GVHVAAYEED KAEGTILRSY IILQRKLQKS LFED

Best Arabidopsis Sequence Match ( AT5G10240.2 )
(BLAST)

001: MCGILAVLGC VDNSQAKRSR IIELSRRLRH RGPDWSGLHC YEDCYLAHER LAIVDPTSGD QPLYNEDKTI AVTVNGEIYN HKALRENLKS HQFRTGSDCE
101: VIAHLVKHGE EFVDMLDGMF AFVLLDTRDK SFIAARDAIG ITPLYIGWGL DGSVWFASEM KALSDDCEQF MCFPPGHIYS SKQGGLRRWY NPPWFSEVVP
201: STPYDPLVVR NTFEKAVIKR LMTDVPFGVL LSGGLDSSLV ASVALRHLEK SEAACQWGSK LHTFCIGLKG SPDLKAGREV ADYLGTRHHE LHFTVQDGID
301: AIEEVIYHVE TYDVTTIRAS TPMFLMSRKI KSLGVKMVLS GEGSDEIFGG YLYFHKAPNK KEFHEETCRK IKALHQYDCL RANKSTSAWG VEARVPFLDK
401: EFINVAMSID PEWKMIRPDL GRIEKWVLRN AFDDEKNPYL PKHILYRQKE QFSDGVGYSW IDGLKDHANK HVSETMLMNA SFVFPDNTPL TKEAYYYRTI
501: FEKFFPKSAA RATVPGGPSV ACSTAKAVEW DAAWSQNLDP SGRAALGVHV SAYGEDKTED SRPEKLQKLA EKTPAIV

Arabidopsis Description

ASN3Asparagine synthetase [glutamine-hydrolyzing] 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.