Factsheet for Solyc04g055200.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97578	Soybean	cytosol	85.96	60.28
KRH31291	Soybean	cytosol, nucleus	85.21	60.07
Bra024345.1-P	Field mustard	cytosol	84.71	59.82
CDY08829	Canola	cytosol	84.71	59.82
CDY14529	Canola	cytosol	84.46	59.65
AT5G10240.1	Thale cress	cytosol	85.71	59.17
AT5G65010.2	Thale cress	cytosol	84.96	58.55
Bra006053.1-P	Field mustard	mitochondrion, plastid	84.96	58.45
CDX78372	Canola	plastid	84.96	58.45
CDX81165	Canola	plastid	84.96	58.45
EER89574	Sorghum	cytosol	86.22	58.21
TraesCS1B01G408200.1	Wheat	cytosol, plastid	84.96	57.75
TraesCS1B01G453600.1	Wheat	cytosol, plastid	85.21	57.73
Os06t0265000-01	Rice	cytosol	85.46	57.7
Zm00001d045675_P003	Maize	extracellular	85.21	57.53
TraesCS1A01G382800.1	Wheat	cytosol, mitochondrion	84.46	57.41
TraesCS1A01G422100.1	Wheat	cytosol, mitochondrion	84.21	57.05
TraesCS1D01G390500.1	Wheat	cytosol, plastid	84.46	57.02
GSMUA_Achr9P15390_001	Banana	cytosol, mitochondrion	88.72	55.92
TraesCS1D01G430300.1	Wheat	cytosol, mitochondrion	73.93	55.77
Solyc06g007180.2.1	Tomato	cytosol, plastid	79.7	53.9
HORVU1Hr1G092110.4	Barley	cytosol, plastid	84.71	53.14
HORVU1Hr1G084370.2	Barley	plastid	84.71	51.45
CDY23169	Canola	mitochondrion	12.03	51.06
CDX87183	Canola	cytosol	17.04	48.57
CDY01480	Canola	cytosol	17.04	48.57
CDY54341	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.04	48.57
CDY50475	Canola	cytosol	17.04	48.57
CDY01568	Canola	cytosol	17.04	48.57
CDY17904	Canola	cytosol	16.79	47.18
CDX86918	Canola	cytosol, mitochondrion	12.28	36.57
Solyc04g055210.2.1	Tomato	plastid	3.01	6.03

Protein Annotations

Gene3D:3.40.50.620	MapMan:4.1.2.1.1	InterPro:Asn_synthase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004066
GO:GO:0005488	GO:GO:0005515	GO:GO:0006529	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009646	GO:GO:0009987	GO:GO:0042803	InterPro:IPR014729	UniProt:K4BSR7
PFAM:PF00733	PANTHER:PTHR11772	PANTHER:PTHR11772:SF13	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	EnsemblPlantsGene:Solyc04g055200.2
EnsemblPlants:Solyc04g055200.2.1	UniParc:UPI0002765C53	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4:-:53823438..53829114

Molecular Weight (calculated)

45059.4 Da

IEP (calculated)

6.997

GRAVY (calculated)

-0.372

Length

399 amino acids

Sequence
(BLAST)

001: MKALSDDCER FVSFLPGHIY SSKNGGLRRW YNPPWFSETI PSTPYDPLVL RKAFEKAVVK RLMTDVPFGV LLSGGLDSSL VAAVASRYLA DTDAGRQWGS
101: QLHTFCVGLK GSPDLKAARE VADYIGTRHH EFHFTVQEGI DALEEVIYHV ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGSDEIFG GYLYFHKAPN
201: KEEFHQETCR KIKALHLYDC LRANKSTSAW GVEARVPFLD KEFINIAMNI DPEWKMIRPD LGRIEKWVVR NAFDDDQNPY LPKHILYRQK EQFSDGVGYS
301: WIDGLKDHAN SQVSDSMLAN ASFVYPHNTP TTKEGYYYRT IFERYFPKAA ARETVPGGPS VACSTAKAVE WDAAWSKNLD PSGRAALGVH EAAYEVKEL

Best Arabidopsis Sequence Match ( AT5G10240.2 )
(BLAST)

001: MCGILAVLGC VDNSQAKRSR IIELSRRLRH RGPDWSGLHC YEDCYLAHER LAIVDPTSGD QPLYNEDKTI AVTVNGEIYN HKALRENLKS HQFRTGSDCE
101: VIAHLVKHGE EFVDMLDGMF AFVLLDTRDK SFIAARDAIG ITPLYIGWGL DGSVWFASEM KALSDDCEQF MCFPPGHIYS SKQGGLRRWY NPPWFSEVVP
201: STPYDPLVVR NTFEKAVIKR LMTDVPFGVL LSGGLDSSLV ASVALRHLEK SEAACQWGSK LHTFCIGLKG SPDLKAGREV ADYLGTRHHE LHFTVQDGID
301: AIEEVIYHVE TYDVTTIRAS TPMFLMSRKI KSLGVKMVLS GEGSDEIFGG YLYFHKAPNK KEFHEETCRK IKALHQYDCL RANKSTSAWG VEARVPFLDK
401: EFINVAMSID PEWKMIRPDL GRIEKWVLRN AFDDEKNPYL PKHILYRQKE QFSDGVGYSW IDGLKDHANK HVSETMLMNA SFVFPDNTPL TKEAYYYRTI
501: FEKFFPKSAA RATVPGGPSV ACSTAKAVEW DAAWSQNLDP SGRAALGVHV SAYGEDKTED SRPEKLQKLA EKTPAIV

Arabidopsis Description

ASN3Asparagine synthetase [glutamine-hydrolyzing] 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.