Factsheet for GSMUA_Achr9P15390_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 4
plastid 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g055200.2.1	Tomato	cytosol	55.92	88.72
Os06t0265000-01	Rice	cytosol	79.3	84.94
TraesCS1D01G430300.1	Wheat	cytosol, mitochondrion	70.77	84.69
KRH31291	Soybean	cytosol, nucleus	75.51	84.45
EER89574	Sorghum	cytosol	78.83	84.43
Zm00001d045675_P003	Maize	extracellular	78.83	84.43
AT5G10240.1	Thale cress	cytosol	76.94	84.26
KRG97578	Soybean	cytosol	75.67	84.18
CDY08829	Canola	cytosol	75.04	84.07
Bra024345.1-P	Field mustard	cytosol	75.04	84.07
TraesCS1B01G408200.1	Wheat	cytosol, plastid	77.88	83.99
TraesCS1A01G382800.1	Wheat	cytosol, mitochondrion	77.73	83.82
CDY14529	Canola	cytosol	74.72	83.72
TraesCS1B01G453600.1	Wheat	cytosol, plastid	77.88	83.7
AT5G65010.2	Thale cress	cytosol	76.46	83.59
TraesCS1D01G390500.1	Wheat	cytosol, plastid	77.88	83.42
TraesCS1A01G422100.1	Wheat	cytosol, mitochondrion	77.41	83.19
Bra006053.1-P	Field mustard	mitochondrion, plastid	74.25	81.03
CDX78372	Canola	plastid	74.09	80.86
CDX81165	Canola	plastid	74.09	80.86
HORVU1Hr1G092110.4	Barley	cytosol, plastid	77.57	77.2
GSMUA_Achr9P04460_001	Banana	cytosol	68.4	76.1
HORVU1Hr1G084370.2	Barley	plastid	78.04	75.19
GSMUA_Achr5P28200_001	Banana	cytosol	70.62	75.13
CDY23169	Canola	mitochondrion	8.53	57.45
CDY54341	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	11.69	52.86
CDY01568	Canola	cytosol	11.69	52.86
CDY01480	Canola	cytosol	11.69	52.86
CDX87183	Canola	cytosol	11.69	52.86
CDY50475	Canola	cytosol	11.53	52.14
CDY17904	Canola	cytosol	11.53	51.41
CDX86918	Canola	cytosol, mitochondrion	8.21	38.81

Protein Annotations

KEGG:00250+6.3.5.4	Gene3D:3.40.50.620	Gene3D:3.60.20.10	MapMan:4.1.2.1.1	InterPro:AsnB_N	InterPro:Asn_synth_AEB
InterPro:Asn_synthase	ncoils:Coil	InterPro:GATase_2_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004066	GO:GO:0005488	GO:GO:0005524	GO:GO:0006529	GO:GO:0006541	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr9G15390_001	EnsemblPlants:GSMUA_Achr9P15390_001
EnsemblPlants:GSMUA_Achr9T15390_001	InterPro:IPR014729	InterPro:IPR017932	InterPro:IPR029055	UniProt:M0U0J7	InterPro:Ntn_hydrolases_N
PFAM:PF00733	PFAM:PF13537	PIRSF:PIRSF001589	PFscan:PS51278	PANTHER:PTHR11772	PANTHER:PTHR11772:SF13
InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF56235	TIGRFAMs:TIGR01536	UniParc:UPI000296EAB3	SEG:seg

Description

Asparagine synthetase [glutamine-hydrolyzing] [Source:GMGC_GENE;Acc:GSMUA_Achr9G15390_001]

Coordinates

chr9:-:10095365..10109791

Molecular Weight (calculated)

70882.0 Da

IEP (calculated)

6.160

GRAVY (calculated)

-0.245

Length

633 amino acids

Sequence
(BLAST)

001: MCGILAVLGC ADTSLAKRSR IIELSRRLQH RGPDWSGLHC FEDCYLAHQR LAIVDPTSGD QPLYNEDKSI VVTVNGEIYN HEELRAKLKS HQFRTGSDCE
101: VIAHLYEEYG EDFVDMLDGM FSFVLLDTRD KSFIAARDAI GITPLYVGWG LDGSVWFASE MKALSDDCER FVSFLPGHIY SSKKGGLRRW YNPPWFSECT
201: PSAPYDALAL REAFEKACAD SLLIIESVDE HNFDGTSLHF KSLTMKVHLS PYYCFSGAAV VKRLMTDVPF GVLLSGGLDS SLVAAVALRH LAKAKVARQW
301: GSQLHSFCIG LKGSPDLKAA REVADYLGTF HHEFHFTVQE GIDALAEVIY HIETYDVTTI RASTPMFLMS RKIKSLGVKM VLSGEGSDEI FGGYLYFHKA
401: PNKEEFHSET CRKIKALHLY DCLRANKSTS AWGVEARVPF LDKQFIDIAM DIDPEWKMIR RDLGRIEKWV LRNAFDDDQN PYLPKHILYR QKEQFSDGVG
501: YGWIDGLKDH ANEHVSDAML MNASFVYPEN TPTTKEAYYY RSIFERFFPK NAARSTVPGG PSVACSTAKA VEWDAAWSKN PDPSGRAALG VHDAAYQEAP
601: EKTLATENSS SVDGHLQKLQ DAMVEATATA TAL

Best Arabidopsis Sequence Match ( AT5G10240.1 )
(BLAST)

001: MCGILAVLGC VDNSQAKRSR IIELSRRLRH RGPDWSGLHC YEDCYLAHER LAIVDPTSGD QPLYNEDKTI AVTVNGEIYN HKALRENLKS HQFRTGSDCE
101: VIAHLYEEHG EEFVDMLDGM FAFVLLDTRD KSFIAARDAI GITPLYIGWG LDGSVWFASE MKALSDDCEQ FMCFPPGHIY SSKQGGLRRW YNPPWFSEVV
201: PSTPYDPLVV RNTFEKAVIK RLMTDVPFGV LLSGGLDSSL VASVALRHLE KSEAACQWGS KLHTFCIGLK GSPDLKAGRE VADYLGTRHH ELHFTVQDGI
301: DAIEEVIYHV ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGSDEIFG GYLYFHKAPN KKEFHEETCR KIKALHQYDC LRANKSTSAW GVEARVPFLD
401: KEFINVAMSI DPEWKMIRPD LGRIEKWVLR NAFDDEKNPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAN KHVSETMLMN ASFVFPDNTP LTKEAYYYRT
501: IFEKFFPKSA ARATVPGGPS VACSTAKAVE WDAAWSQNLD PSGRAALGVH VSAYGEDKTE DSRPEKLQKL AEKTPAIV

Arabidopsis Description

ASN3Asparagine synthetase [glutamine-hydrolyzing] 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.