CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01568	Canola	cytosol	97.86	97.86
CDY54341	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	97.14	97.14
CDY01480	Canola	cytosol	96.43	96.43
CDY50475	Canola	cytosol	95.0	95.0
CDY17904	Canola	cytosol	94.29	92.96
CDX86918	Canola	cytosol, mitochondrion	62.14	64.93
CDY23169	Canola	mitochondrion	43.57	64.89
Solyc04g055200.2.1	Tomato	cytosol	48.57	17.04
AT5G10240.1	Thale cress	cytosol	61.43	14.88
CDX81165	Canola	plastid	60.71	14.66
CDX78372	Canola	plastid	60.0	14.48
CDY08829	Canola	cytosol	54.29	13.45
CDY14529	Canola	cytosol	53.57	13.27
TraesCS1A01G382800.1	Wheat	cytosol, mitochondrion	55.0	13.12
TraesCS1B01G408200.1	Wheat	cytosol, plastid	54.29	12.95
TraesCS1B01G453600.1	Wheat	cytosol, plastid	53.57	12.73
KRG97578	Soybean	cytosol	51.43	12.65
TraesCS1D01G390500.1	Wheat	cytosol, plastid	52.86	12.52
TraesCS1A01G422100.1	Wheat	cytosol, mitochondrion	52.14	12.39
KRH31291	Soybean	cytosol, nucleus	50.0	12.37
Zm00001d045675_P003	Maize	extracellular	51.43	12.18
EER89574	Sorghum	cytosol	51.43	12.18
Os06t0265000-01	Rice	cytosol	51.43	12.18
GSMUA_Achr9P15390_001	Banana	cytosol, mitochondrion	52.86	11.69
CDY71298	Canola	cytosol	45.71	11.53
HORVU1Hr1G092110.4	Barley	cytosol, plastid	51.43	11.32
CDX99060	Canola	cytosol	46.43	11.11
HORVU1Hr1G084370.2	Barley	plastid	50.71	10.81
CDX77846	Canola	cytosol	45.0	10.64
CDY21785	Canola	cytosol	44.29	10.49
TraesCS1D01G430300.1	Wheat	cytosol, mitochondrion	22.14	5.86
CDY51796	Canola	cytosol	3.57	2.22

Protein Annotations

EnsemblPlants:CDX87183	EnsemblPlantsGene:GSBRNA2T00146109001	PANTHER:PTHR11772	PANTHER:PTHR11772:SF13	ProteinID:CDX87183	ProteinID:CDX87183.1
UniParc:UPI0004EDB46F	MapMan:35.1	:	:	:	:

Description

BnaC09g04980D

Coordinates

chrLK031849:-:987549..988458

Molecular Weight (calculated)

15706.8 Da

IEP (calculated)

8.471

GRAVY (calculated)

-0.326

Length

140 amino acids

Sequence
(BLAST)

001: MRHFNLKFVP IRLVEDYLDT IQRIGDLFFG LSDGPLLSLR FRRTIRPDIE RIEKWVLRIA FDDEKNPYLP KSAARATVPG GPSVPCSTAK AVEWDAAWSQ
101: NLDLSGRAAL GVHVAAYEED KAEGTRPKKL QAEKTAEGIV

Best Arabidopsis Sequence Match ( AT5G10240.1 )
(BLAST)

001: MCGILAVLGC VDNSQAKRSR IIELSRRLRH RGPDWSGLHC YEDCYLAHER LAIVDPTSGD QPLYNEDKTI AVTVNGEIYN HKALRENLKS HQFRTGSDCE
101: VIAHLYEEHG EEFVDMLDGM FAFVLLDTRD KSFIAARDAI GITPLYIGWG LDGSVWFASE MKALSDDCEQ FMCFPPGHIY SSKQGGLRRW YNPPWFSEVV
201: PSTPYDPLVV RNTFEKAVIK RLMTDVPFGV LLSGGLDSSL VASVALRHLE KSEAACQWGS KLHTFCIGLK GSPDLKAGRE VADYLGTRHH ELHFTVQDGI
301: DAIEEVIYHV ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGSDEIFG GYLYFHKAPN KKEFHEETCR KIKALHQYDC LRANKSTSAW GVEARVPFLD
401: KEFINVAMSI DPEWKMIRPD LGRIEKWVLR NAFDDEKNPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAN KHVSETMLMN ASFVFPDNTP LTKEAYYYRT
501: IFEKFFPKSA ARATVPGGPS VACSTAKAVE WDAAWSQNLD PSGRAALGVH VSAYGEDKTE DSRPEKLQKL AEKTPAIV

Arabidopsis Description

ASN3Asparagine synthetase [glutamine-hydrolyzing] 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.