Factsheet for TraesCS1D01G430300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G422100.1	Wheat	cytosol, mitochondrion	94.9	85.23
TraesCS1B01G453600.1	Wheat	cytosol, plastid	94.71	85.06
TraesCS1D01G390500.1	Wheat	cytosol, plastid	94.14	84.26
Os06t0265000-01	Rice	cytosol	89.98	80.54
EER89574	Sorghum	cytosol	88.09	78.85
Zm00001d045675_P003	Maize	extracellular	87.52	78.34
HORVU1Hr1G092110.4	Barley	cytosol, plastid	94.14	78.3
KRH31291	Soybean	cytosol, nucleus	83.18	77.74
Bra024345.1-P	Field mustard	cytosol	82.04	76.81
CDY08829	Canola	cytosol	82.04	76.81
CDY14529	Canola	cytosol	82.04	76.81
KRG97578	Soybean	cytosol	82.61	76.8
AT5G10240.1	Thale cress	cytosol	82.99	75.95
AT5G65010.2	Thale cress	cytosol	82.42	75.3
Solyc04g055200.2.1	Tomato	cytosol	55.77	73.93
CDX81165	Canola	plastid	80.53	73.45
CDX78372	Canola	plastid	80.53	73.45
Bra006053.1-P	Field mustard	mitochondrion, plastid	80.34	73.28
GSMUA_Achr9P15390_001	Banana	cytosol, mitochondrion	84.69	70.77
TraesCS5D01G159100.1	Wheat	cytosol	75.24	68.03
TraesCS3D01G077300.1	Wheat	cytosol	74.29	67.64
TraesCS4D01G195100.1	Wheat	mitochondrion, plastid	69.57	62.37
CDX87183	Canola	cytosol	5.86	22.14
CDY50475	Canola	cytosol	5.67	21.43
CDY54341	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	5.67	21.43
CDY01568	Canola	cytosol	5.67	21.43
CDY01480	Canola	cytosol	5.67	21.43
CDY17904	Canola	cytosol	5.67	21.13
CDY23169	Canola	mitochondrion	1.51	8.51
CDX86918	Canola	cytosol, mitochondrion	1.89	7.46

Protein Annotations

KEGG:00250+6.3.5.4	Gene3D:3.40.50.620	Gene3D:3.60.20.10	MapMan:4.1.2.1.1	InterPro:AsnB_N	InterPro:Asn_synth_AEB
InterPro:Asn_synthase	InterPro:GATase_2_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004066	GO:GO:0006529
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR014729	InterPro:IPR017932
InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00733	PFAM:PF13537	PIRSF:PIRSF001589	PFscan:PS51278
PANTHER:PTHR11772	PANTHER:PTHR11772:SF13	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF56235	EnsemblPlantsGene:TraesCS1D01G430300
EnsemblPlants:TraesCS1D01G430300.1	TIGR:cd00712	TIGR:cd01991	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:-:481384495..481389740

Molecular Weight (calculated)

60131.9 Da

IEP (calculated)

6.730

GRAVY (calculated)

-0.272

Length

529 amino acids

Sequence
(BLAST)

001: MCGILAVLGV GDVSLAKRSR IIELSRRLRH RGPDWSGIHS FEDCYLAHQR LAIVDPTSGD QPLYNEDKTV VVTVNGEIYN HEELKAKLKS HQFQTGSDCE
101: VIAHLYEEYG EEFVDMLDGM FSFVLLDTRD KSFIAARDAI GICPLYMGWG LDGSVWFSSE MKALSDDCER FISFPPGHLY SSKAGGLRRW YNPPWFSESI
201: PSTPYDPVLI RESFEKAVIK RLMTDVPFGV LLSGGLDSSL VASVVSRHLA EAKVARQWGN QLHTFCIGLK GSPDLKAAKE VADYLGTVHH ELHFTVQEGI
301: DALEEVIYHI ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGSDEIFG GYLYFHKAPN KKELHEETCR KIKALHLYDC LRANKATSAW GLEARVPFLD
401: KSFINVAMDL DPECKMIRRD LGRIEKWVLR NAFDDEEKPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAN AHVSDSMMTN ASFVYPDNTP TTKEAYYYRT
501: VFEKFYPKVQ KPQRAFNLVV IFRRISSAP

Best Arabidopsis Sequence Match ( AT3G47340.2 )
(BLAST)

001: MCGILAVLGC SDDSQAKRVR VLELSRRLRH RGPDWSGLYQ NGDNYLAHQR LAVIDPASGD QPLFNEDKTI VVTVNGEIYN HEELRKRLKN HKFRTGSDCE
101: VIAHLYEEYG VDFVDMLDGI FSFVLLDTRD NSFMVARDAI GVTSLYIGWG LDGSVWISSE MKGLNDDCEH FETFPPGHFY SSKLGGFKQW YNPPWFNESV
201: PSTPYEPLAI RRAFENAVIK RLMTDVPFGV LLSGGLDSSL VASITARHLA GTKAAKQWGP QLHSFCVGLE GSPDLKAGKE VAEYLGTVHH EFHFSVQDGI
301: DAIEDVIYHV ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGADEIFG GYLYFHKAPN KKEFHQETCR KIKALHKYDC LRANKSTSAF GLEARVPFLD
401: KDFINTAMSL DPESKMIKPE EGRIEKWVLR RAFDDEERPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAA QNVNDKMMSN AGHIFPHNTP NTKEAYYYRM
501: IFERFFPQVR VL

Arabidopsis Description

ASN1DIN6 [Source:UniProtKB/TrEMBL;Acc:A0A178VBT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.