CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024345.1-P	Field mustard	cytosol	100.0	100.0
CDY14529	Canola	cytosol	99.29	99.29
AT5G65010.2	Thale cress	cytosol	94.87	92.57
CDX78372	Canola	plastid	89.73	87.41
CDX81165	Canola	plastid	89.56	87.24
Solyc04g055200.2.1	Tomato	cytosol	59.82	84.71
KRH31291	Soybean	cytosol, nucleus	84.6	84.45
KRG97578	Soybean	cytosol	83.89	83.3
TraesCS1D01G430300.1	Wheat	cytosol, mitochondrion	76.81	82.04
TraesCS1B01G453600.1	Wheat	cytosol, plastid	83.89	80.48
TraesCS1A01G422100.1	Wheat	cytosol, mitochondrion	83.89	80.48
TraesCS1B01G408200.1	Wheat	cytosol, plastid	83.54	80.41
TraesCS1A01G382800.1	Wheat	cytosol, mitochondrion	83.36	80.24
Os06t0265000-01	Rice	cytosol	83.89	80.2
EER89574	Sorghum	cytosol	83.89	80.2
TraesCS1D01G390500.1	Wheat	cytosol, plastid	83.54	79.86
Zm00001d045675_P003	Maize	extracellular	83.19	79.53
GSMUA_Achr9P15390_001	Banana	cytosol, mitochondrion	84.07	75.04
HORVU1Hr1G092110.4	Barley	cytosol, plastid	83.36	74.06
CDY71298	Canola	cytosol	72.04	73.33
CDX99060	Canola	cytosol	75.75	73.16
CDY21785	Canola	cytosol	75.58	72.25
HORVU1Hr1G084370.2	Barley	plastid	83.36	71.69
CDX77846	Canola	cytosol	75.04	71.62
CDY51796	Canola	cytosol	27.26	68.44
CDY23169	Canola	mitochondrion	9.56	57.45
CDY54341	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.63	55.0
CDY50475	Canola	cytosol	13.63	55.0
CDY01568	Canola	cytosol	13.63	55.0
CDY01480	Canola	cytosol	13.63	55.0
CDX87183	Canola	cytosol	13.45	54.29
CDY17904	Canola	cytosol	13.45	53.52
CDX86918	Canola	cytosol, mitochondrion	10.09	42.54

Protein Annotations

KEGG:00250+6.3.5.4	Gene3D:3.40.50.620	Gene3D:3.60.20.10	MapMan:4.1.2.1.1	GO:A0A078F710	UniProt:A0A078F710
InterPro:AsnB_N	InterPro:Asn_synth_AEB	InterPro:Asn_synthase	EnsemblPlants:CDY08829	ProteinID:CDY08829	ProteinID:CDY08829.1
InterPro:GATase_2_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004066	GO:GO:0005488
GO:GO:0005524	GO:GO:0006529	GO:GO:0006541	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00000793001	InterPro:IPR014729	InterPro:IPR017932	InterPro:IPR029055
InterPro:Ntn_hydrolases_N	PFAM:PF00733	PFAM:PF13537	PIRSF:PIRSF001589	PFscan:PS51278	PANTHER:PTHR11772
PANTHER:PTHR11772:SF13	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF56235	TIGRFAMs:TIGR01536	UniPathway:UPA00134
UniParc:UPI000253F48F	SEG:seg	:	:	:	:

Description

BnaA06g23950DBnaA06g23950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F710]

Coordinates

chrLK031989:-:773762..776834

Molecular Weight (calculated)

63796.9 Da

IEP (calculated)

6.549

GRAVY (calculated)

-0.312

Length

565 amino acids

Sequence
(BLAST)

001: MCGILAVLGC IDNSQAKRSR IIELSRRLRH RGPDWSGLHC HEDCYLAHER LAIIDPTSGD QPLYNQDKTV VVTVNGEIYN HKILREKLKS HQFWTGSDCE
101: VIAHLYEEHG EEFIDMLDGM FAFVLLDTRD KSFIAARDAI GVIPLYIGWG VDGSVWFASE MKALSDDCEQ FMAFPPGHIY SSKQGGLRRW YNPSWYSELV
201: PSTPYDPLVL RNAFEQAVIK RLMTDVPFGV LLSGGLDSSL VASVALRHLE KSEAAQWGSQ LHTFCIGLKG SPDLKAGREV ANYLGTRHHE FQFTVQDGID
301: AIEEVIYHIE TYDVTTIRAS TPMFLMSRKI KSLGVKMVLS GEGSDEILGG YLYFHKAPNK KEFHEETCRK IKALHQYDCL RANKSTSAWG VEARVPFLDK
401: EFLNVAMSID PEWKMIRPDL GRIEKWVLRN AFDDEEKPYL PKHILYRQKE QFSDGVGYSW IDGLKDHANK HVSDTMLSNA SFVFPDNTPM TKEAYYYRTI
501: FEKFFPKSAA RATVPGGPSI ACSTAKAIEW DATWSKNLDP SGRAALGVHV AAYEEDKAAN GALRS

Best Arabidopsis Sequence Match ( AT5G65010.1 )
(BLAST)

001: MCGILAVLGC IDNSQAKRSR IIELSRRLRH RGPDWSGLHC YEDCYLAHER LAIIDPTSGD QPLYNEDKTV AVTVNGEIYN HKILREKLKS HQFRTGSDCE
101: VIAHLYEEHG EEFIDMLDGM FAFVLLDTRD KSFIAARDAI GITPLYIGWG LDGSVWFASE MKALSDDCEQ FMSFPPGHIY SSKQGGLRRW YNPPWYNEQV
201: PSTPYDPLVL RNAFEKAVIK RLMTDVPFGV LLSGGLDSSL VAAVALRHLE KSEAARQWGS QLHTFCIGLQ GSPDLKAGRE VADYLGTRHH EFQFTVQDGI
301: DAIEEVIYHI ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGSDEILG GYLYFHKAPN KKEFHEETCR KIKALHQFDC LRANKSTSAW GVEARVPFLD
401: KEFLNVAMSI DPEWKLIKPD LGRIEKWVLR NAFDDEERPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAN KHVSDTMLSN ASFVFPDNTP LTKEAYYYRT
501: IFEKFFPKSA ARATVPGGPS IACSTAKAVE WDATWSKNLD PSGRAALGVH VAAYEEDKAA AAAKAGSDLV DPLPKNGT

Arabidopsis Description

ASN2asparagine synthetase 2 [Source:TAIR;Acc:AT5G65010]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.