Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0372g00010.t01 | Wine grape | mitochondrion, nucleus | 83.89 | 54.96 |
| VIT_00s0361g00110.t01 | Wine grape | nucleus | 13.7 | 34.97 |
| VIT_04s0023g03900.t01 | Wine grape | cytosol | 3.12 | 6.4 |
| VIT_00s0361g00100.t01 | Wine grape | cytosol | 14.18 | 5.27 |
| VIT_18s0001g14750.t01 | Wine grape | cytosol | 6.97 | 4.96 |
| VIT_04s0023g03920.t01 | Wine grape | nucleus | 3.85 | 4.46 |
Protein Annotations
| ArrayExpress:VIT_00s0847g00010 | EMBL:FN595310 | EnsemblPlants:VIT_00s0847g00010.t01 | EnsemblPlantsGene:VIT_00s0847g00010 | ncoils:Coil | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF469 | ProteinID:CCB48455 | ProteinID:CCB48455.1 | SEG:seg | unigene:Vvi.14044 | UniParc:UPI000210A9BC |
| UniProt:F6H8B2 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:36065794..36067231
Molecular Weight (calculated)
45270.3 Da
IEP (calculated)
5.120
GRAVY (calculated)
-0.679
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDVVEVNKQ SVQAVVDPTE KVVEWATSSG LKESETVKPP STSSGLLIPE MSQIVEGNNP LLVDIGPPGK MGISEGTYFV PPSDQSGNIM DLLTGDEWNA
101: SHVPCEKQEG EWNLSSGISS FANPPLLVES LKSTNEDLGS KVDAAPQKRE EMVDADRKLH VSEANSGQAI ASQKNKSSIQ QEILSHKRKA VSLKREGKLA
201: EARDELRQAK LLEKNLEEDD PQPRSSPSDT SISSSSVTSI GQRTQTLVDS APKMLSGRDR FKLQQESLSH KRSALKLRRE GRIEEAEAEF ELAKALETQL
301: EELAAHDAAK SSAKGAEPVD DVHVDDLLDP QLLSALKAIG LEDASPLAQS PEKPEPAKLH ISKSDSSSQE KGQLEERIKA EKVKAVNLKR AGKQAEALDA
401: LRRAKMFEKK LNSLTP
101: SHVPCEKQEG EWNLSSGISS FANPPLLVES LKSTNEDLGS KVDAAPQKRE EMVDADRKLH VSEANSGQAI ASQKNKSSIQ QEILSHKRKA VSLKREGKLA
201: EARDELRQAK LLEKNLEEDD PQPRSSPSDT SISSSSVTSI GQRTQTLVDS APKMLSGRDR FKLQQESLSH KRSALKLRRE GRIEEAEAEF ELAKALETQL
301: EELAAHDAAK SSAKGAEPVD DVHVDDLLDP QLLSALKAIG LEDASPLAQS PEKPEPAKLH ISKSDSSSQE KGQLEERIKA EKVKAVNLKR AGKQAEALDA
401: LRRAKMFEKK LNSLTP
0001: MLEKIGLPPK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG TCTQQRLSLR GQGDSPVRIC EPCKKIEEAA RFELRHGYKN RAAKGGSSKR
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
Arabidopsis Description
At1g61690 [Source:UniProtKB/TrEMBL;Acc:Q6NPS1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.