Factsheet for VIT_03s0038g03950.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 4
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P07210_001	Banana	cytosol	76.95	75.24
CDY52599	Canola	cytosol	50.65	73.93
PGSC0003DMT400038023	Potato	cytosol	74.03	73.79
AT2G17270.1	Thale cress	cytosol, mitochondrion, plastid	72.73	72.49
CDY07867	Canola	cytosol, peroxisome, plastid	71.75	71.52
VIT_07s0031g02290.t01	Wine grape	cytosol	71.75	71.29
CDX87998	Canola	cytosol, peroxisome, plastid	71.43	71.2
Bra009654.1-P	Field mustard	cytosol, peroxisome, plastid	71.1	70.87
Bra002048.1-P	Field mustard	plastid	48.7	70.42
EER99327	Sorghum	mitochondrion	71.43	69.18
Zm00001d006315_P001	Maize	mitochondrion	39.29	69.14
TraesCS5A01G354900.1	Wheat	cytosol	70.78	66.87
TraesCS5D01G362200.1	Wheat	cytosol, peroxisome, plastid	70.78	66.87
HORVU5Hr1G079920.2	Barley	cytosol, mitochondrion, plastid	70.45	66.56
Os09t0554000-01	Rice	cytosol, mitochondrion, plastid	39.29	66.48
TraesCS5B01G357100.1	Wheat	cytosol, mitochondrion, plastid	70.45	66.16
HORVU5Hr1G087910.3	Barley	cytosol, mitochondrion	70.45	64.2
CDY66482	Canola	plastid	49.03	61.63
VIT_17s0000g00400.t01	Wine grape	extracellular	48.38	49.17
VIT_14s0068g01260.t01	Wine grape	plastid	49.35	41.87
VIT_14s0068g01250.t01	Wine grape	plastid	5.84	28.12

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100258841	wikigene:100258841	MapMan:24.2.13	EMBL:AM437734	ProteinID:CAN78388
ProteinID:CAN78388.1	ProteinID:CBI37731	ProteinID:CBI37731.3	UniProt:D7U4R2	EMBL:FN596508	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628
GO:GO:0009651	GO:GO:0015114	GO:GO:0016020	GO:GO:0016021	GO:GO:0035435	InterPro:IPR018108
InterPro:IPR023395	EntrezGene:LOC100258841	wikigene:LOC100258841	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF412	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI00015C8CD5
ArrayExpress:VIT_03s0038g03950	EnsemblPlantsGene:VIT_03s0038g03950	EnsemblPlants:VIT_03s0038g03950.t01	RefSeq:XP_002282989	RefSeq:XP_002282989.1	:

Description

No Description!

Coordinates

chr3:+:2885232..2887990

Molecular Weight (calculated)

33941.9 Da

IEP (calculated)

8.849

GRAVY (calculated)

0.094

Length

308 amino acids

Sequence
(BLAST)

001: MMRVEGRAYQ ELSPSYYGIC TVGGMLSAGT IHLAITPLDV LKVNMQVNPI KYNSITSGLN TLWKEQGPSA LWRGWSGKLF GYGVQGGCKF GLYEYFKRIY
101: SDVLVDQNRS VIFFVSSASA QVFADVALCP FEAVKVRVQT QPHFAKGLAD GFPKLYATEG LSGFYKGLFP LWGRNLPFSM TMFSTFEHSI DFIYDNIIQK
201: KKEDCSVAQQ LGVTCLAGYA AGAFGTLISN PADNIVSSLY NKNAENVLQA AKNIGFANLF TRSLPLRITF VGPVVTLQWF FYDTIKVLSG FPTSGGPVRH
301: IEEADRSA

Best Arabidopsis Sequence Match ( AT2G17270.1 )
(BLAST)

001: MTRVKSKLDE ELSSPWFYTV CTMGGMLSAG TTHLAITPLD VLKVNMQVNP VKYNSIPSGF STLLREHGHS YLWRGWSGKL LGYGVQGGCR FGLYEYFKTL
101: YSDVLPNHNR TSIYFLSSAS AQIFADMALC PFEAIKVRVQ TQPMFAKGLL DGFPRVYRSE GLAGFHRGLF PLWCRNLPFS MVMFSTFEQS VEFIYQKIIQ
201: KRKQDCSKAQ QLGVTCLAGY TAGAVGTIIS NPADVVLSSL YNNKAKNVLQ AVRNIGFVGL FTRSLPVRIT IVGPVITLQW FFYDAIKVLS GFPTSGGVKK
301: PVDAAKLSV

Arabidopsis Description

MPT1Mitochondrial phosphate carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q7DNC3]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.