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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • cytosol 2
  • mitochondrion 4
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d006315_P001 Maize mitochondrion 52.52 95.43
Os09t0554000-01 Rice cytosol, mitochondrion, plastid 46.86 81.87
HORVU5Hr1G079920.2 Barley cytosol, mitochondrion, plastid 83.65 81.6
TraesCS5B01G357100.1 Wheat cytosol, mitochondrion, plastid 83.96 81.4
TraesCS5A01G354900.1 Wheat cytosol 83.33 81.29
TraesCS5D01G362200.1 Wheat cytosol, peroxisome, plastid 83.02 80.98
HORVU5Hr1G087910.3 Barley cytosol, mitochondrion 83.65 78.7
GSMUA_Achr1P07210_001 Banana cytosol 76.1 76.83
VIT_03s0038g03950.t01 Wine grape cytosol, peroxisome, plastid 69.18 71.43
CDY52599 Canola cytosol 45.28 68.25
AT2G17270.1 Thale cress cytosol, mitochondrion, plastid 64.47 66.34
CDY07867 Canola cytosol, peroxisome, plastid 63.52 65.37
PGSC0003DMT400038023 Potato cytosol 63.52 65.37
KRH28949 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 62.89 65.36
KRH76514 Soybean cytosol, mitochondrion, nucleus 62.89 65.36
CDX87998 Canola cytosol, peroxisome, plastid 63.21 65.05
VIT_07s0031g02290.t01 Wine grape cytosol 63.21 64.84
Bra009654.1-P Field mustard cytosol, peroxisome, plastid 62.89 64.72
Bra002048.1-P Field mustard plastid 42.45 63.38
Solyc03g032030.2.1 Tomato cytosol 63.52 62.35
PGSC0003DMT400048076 Potato cytosol, mitochondrion, nucleus 63.84 59.18
CDY66482 Canola plastid 44.34 57.55
KXG35755 Sorghum plastid 45.91 41.6
EES10896 Sorghum plastid 46.23 40.5
EES07586 Sorghum plastid 45.6 39.08
EER95137 Sorghum cytosol, mitochondrion, plastid 45.28 38.81
EER88051 Sorghum plastid 45.28 38.81
Protein Annotations
Gene3D:1.50.40.10MapMan:24.2.13EntrezGene:8074188UniProt:C5X7R1EnsemblPlants:EER99327ProteinID:EER99327
ProteinID:EER99327.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0005743GO:GO:0006810GO:GO:0006839GO:GO:0006950
GO:GO:0008150GO:GO:0009628GO:GO:0009651GO:GO:0015114GO:GO:0016020GO:GO:0016021
GO:GO:0035435InterPro:IPR018108InterPro:IPR023395InterPro:Mitochondrial_sb/sol_carrierInterPro:Mt_carrier_dom_sfPFAM:PF00153
PFscan:PS50920PANTHER:PTHR24089PANTHER:PTHR24089:SF161EnsemblPlantsGene:SORBI_3002G291800SUPFAM:SSF103506unigene:Sbi.7429
UniParc:UPI0001A83E92RefSeq:XP_002462806.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr2:-:66989959..66993258
Molecular Weight (calculated)
34654.2 Da
IEP (calculated)
9.492
GRAVY (calculated)
0.153
Length
318 amino acids
Sequence
(BLAST)
001: MGDAEAASRV GRRGAAAAAG MRVFSPEYYA LCAGGGMLAA GATHLAITPL DVLKVNMQVN PMKYNSIFSG LNVLVKEEGP SSLWRGWGGK FVGYGVQGGC
101: RFGLYEYFKK RYSDMLVDSN KSTIYFLSSA SAQIIADVAL CPFESVKVRV QTQPMFAKGL VDGFPRVYAT EGLSGFYRGL LPLWGRNLPF SMLMFSAFEH
201: TVDFLYQKVI QKKKEDCSTI QQLGATCVAG YISGAVGTVV SNPADNIVSS LYNKKAENII HAVKSIGFRN LFTRSLPIRI ALVGPVISMQ WFFYDTIKIL
301: TGLPPSGGLP RELEEVNI
Best Arabidopsis Sequence Match ( AT2G17270.1 )
(BLAST)
001: MTRVKSKLDE ELSSPWFYTV CTMGGMLSAG TTHLAITPLD VLKVNMQVNP VKYNSIPSGF STLLREHGHS YLWRGWSGKL LGYGVQGGCR FGLYEYFKTL
101: YSDVLPNHNR TSIYFLSSAS AQIFADMALC PFEAIKVRVQ TQPMFAKGLL DGFPRVYRSE GLAGFHRGLF PLWCRNLPFS MVMFSTFEQS VEFIYQKIIQ
201: KRKQDCSKAQ QLGVTCLAGY TAGAVGTIIS NPADVVLSSL YNNKAKNVLQ AVRNIGFVGL FTRSLPVRIT IVGPVITLQW FFYDAIKVLS GFPTSGGVKK
301: PVDAAKLSV
Arabidopsis Description
MPT1Mitochondrial phosphate carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q7DNC3]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.