CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28949	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	97.71	97.71
VIT_07s0031g02290.t01	Wine grape	cytosol	76.47	75.48
Solyc03g032030.2.1	Tomato	cytosol	73.53	69.44
GSMUA_Achr1P07210_001	Banana	cytosol	68.95	66.98
PGSC0003DMT400048076	Potato	cytosol, mitochondrion, nucleus	73.53	65.6
EER99327	Sorghum	mitochondrion	65.36	62.89
Zm00001d006315_P001	Maize	mitochondrion	35.62	62.29
TraesCS5D01G362200.1	Wheat	cytosol, peroxisome, plastid	66.34	62.27
TraesCS5A01G354900.1	Wheat	cytosol	65.69	61.66
TraesCS5B01G357100.1	Wheat	cytosol, mitochondrion, plastid	66.01	61.59
HORVU5Hr1G079920.2	Barley	cytosol, mitochondrion, plastid	65.03	61.04
HORVU5Hr1G087910.3	Barley	cytosol, mitochondrion	65.03	58.88
Os09t0554000-01	Rice	cytosol, mitochondrion, plastid	34.64	58.24
KRH41081	Soybean	plastid	45.75	39.44
KRH59763	Soybean	endoplasmic reticulum	45.75	39.0
KRH08401	Soybean	endoplasmic reticulum	43.79	38.29
KRG94676	Soybean	plastid	45.75	37.33
KRH06854	Soybean	endoplasmic reticulum	41.18	37.17
KRH70059	Soybean	plastid	34.64	36.55
KRH06851	Soybean	plastid	44.12	36.29

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100788561	MapMan:24.2.13	EMBL:ACUP02000616	EnsemblPlantsGene:GLYMA_01G157100	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628
GO:GO:0009651	GO:GO:0015114	GO:GO:0016020	GO:GO:0016021	GO:GO:0035435	UniProt:I1J8A8
InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KRH76514	ProteinID:KRH76514	ProteinID:KRH76514.1	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF161	SUPFAM:SSF103506
TMHMM:TMhelix	UniParc:UPI00023379FA	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:49479468..49483979

Molecular Weight (calculated)

33779.1 Da

IEP (calculated)

9.130

GRAVY (calculated)

0.167

Length

306 amino acids

Sequence
(BLAST)

001: MVMEGRICEE LKPRYYALCA IGGMLSAGTT HLAITPFDVL KVNMQVHPIK YYSISSCFTS LLREQGPSVL WKGWTGKFFG YGAQGGCRFG LYEYFKEVYS
101: NVLVDQNRSF VFFLSSASAE VFANVALCPF EAVKVRVQAQ PCFAKGLYDG FPKLYASEGT RGFYRGLIPL LGRNIPFSMV MFSTFEHSVD FLYRNVVKRK
201: KEDCSIGQQL GVTCLAGYAA GSVGSFISNP ADNIVSSLYN RKADSLALAI RNIGLANLFT RSLPIRMLLV GPSITLQWFF YDTIKILGGM PTSGEVRTDV
301: RGDGAG

Best Arabidopsis Sequence Match ( AT2G17270.1 )
(BLAST)

001: MTRVKSKLDE ELSSPWFYTV CTMGGMLSAG TTHLAITPLD VLKVNMQVNP VKYNSIPSGF STLLREHGHS YLWRGWSGKL LGYGVQGGCR FGLYEYFKTL
101: YSDVLPNHNR TSIYFLSSAS AQIFADMALC PFEAIKVRVQ TQPMFAKGLL DGFPRVYRSE GLAGFHRGLF PLWCRNLPFS MVMFSTFEQS VEFIYQKIIQ
201: KRKQDCSKAQ QLGVTCLAGY TAGAVGTIIS NPADVVLSSL YNNKAKNVLQ AVRNIGFVGL FTRSLPVRIT IVGPVITLQW FFYDAIKVLS GFPTSGGVKK
301: PVDAAKLSV

Arabidopsis Description

MPT1Mitochondrial phosphate carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q7DNC3]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.