CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 7
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41081	Soybean	plastid	96.1	97.18
VIT_17s0000g00400.t01	Wine grape	extracellular	71.31	84.49
PGSC0003DMT400084471	Potato	cytosol, mitochondrion, plastid	16.71	82.19
Zm00001d052155_P001	Maize	cytosol	28.69	78.03
PGSC0003DMT400069570	Potato	plastid	75.77	75.77
Solyc06g072510.2.1	Tomato	plastid	76.32	75.69
Solyc03g097840.2.1	Tomato	plastid	74.09	75.57
Os04t0448800-01	Rice	plasma membrane	75.77	75.56
EES10896	Sorghum	plastid	76.32	75.48
TraesCS3B01G060300.1	Wheat	plastid	75.49	74.66
Zm00001d018187_P001	Maize	mitochondrion, plastid	76.04	74.59
Zm00001d018183_P001	Maize	plastid	76.04	74.59
EES07586	Sorghum	plastid	76.6	74.12
Os02t0767500-01	Rice	mitochondrion	75.77	73.91
TraesCS2A01G316900.1	Wheat	mitochondrion, plastid	76.04	73.78
TraesCS2D01G314800.1	Wheat	mitochondrion, plastid	75.49	73.64
Os06t0210500-01	Rice	mitochondrion	75.49	73.64
KRG94676	Soybean	plastid	76.88	73.6
TraesCS6D01G310300.1	Wheat	golgi, plastid, unclear	76.6	73.33
EER88051	Sorghum	plastid	75.77	73.32
TraesCS2B01G335500.1	Wheat	plastid	75.21	73.17
TraesCS6A01G331000.1	Wheat	golgi	76.32	72.49
TraesCS6B01G361800.1	Wheat	golgi	76.04	72.41
KRH08401	Soybean	endoplasmic reticulum	69.08	70.86
KRH06851	Soybean	plastid	72.98	70.43
KRH06854	Soybean	endoplasmic reticulum	66.3	70.21
AT3G48850.1	Thale cress	plastid	67.41	66.67
KRH70059	Soybean	plastid	53.76	66.55
CDY37906	Canola	plastid	67.41	66.12
CDX87003	Canola	plastid	67.13	65.85
HORVU2Hr1G078800.1	Barley	cytosol, mitochondrion, plastid	74.93	63.59
HORVU6Hr1G080480.4	Barley	mitochondrion	76.32	63.28
TraesCS4B01G215600.2	Wheat	cytosol, endoplasmic reticulum, mitochondrion	63.79	62.06
TraesCS4D01G216100.2	Wheat	cytosol, endoplasmic reticulum, mitochondrion	63.79	62.06
Bra019570.1-P	Field mustard	plastid	67.41	60.8
EER95137	Sorghum	cytosol, mitochondrion, plastid	61.56	59.57
Zm00001d028528_P001	Maize	cytosol	61.28	57.59
TraesCS4A01G088600.2	Wheat	cytosol, extracellular, mitochondrion	63.79	52.89
KRH76514	Soybean	cytosol, mitochondrion, nucleus	39.0	45.75
GSMUA_Achr9P27150_001	Banana	mitochondrion	29.53	45.69
KRH28949	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	38.72	45.42
HORVU4Hr1G061260.1	Barley	cytosol, mitochondrion	63.79	44.21

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100791467	MapMan:24.2.13	EMBL:ACUP02003341	EnsemblPlantsGene:GLYMA_05G201400	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628
GO:GO:0009651	GO:GO:0015114	GO:GO:0016020	GO:GO:0016021	GO:GO:0035435	UniProt:I1K6S1
InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KRH59763	ProteinID:KRH59763	ProteinID:KRH59763.1	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF460	SUPFAM:SSF103506
UniParc:UPI00023C4AF9	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:38507610..38510859

Molecular Weight (calculated)

38339.8 Da

IEP (calculated)

9.899

GRAVY (calculated)

0.135

Length

359 amino acids

Sequence
(BLAST)

001: MAPSDQSHHS LVPGFLYSSK TLSHLNNNTN HGLPPSSSIA SSSLPQGRTK SPMILSPKEG IRMFSPAYYA ACSAGGIFSC GLTHMAVTPL DLVKCNMQID
101: PVKYKNITSG FGVLLKEQGA KGFFKGWVPT LLGYSAQGAC KFGFYEFFKK YYSDLAGPEN AIKYKTIIYL AGSASAEVIA DVALCPMEAV KVRVQTQPGF
201: ARGLSDGLPK FIKADGVSGL YKGLVPLWGR QIPYTMMKFA SFETIVEKIY KYAIPTPKEQ CSKTKQLGVS FAAGYIAGVL CAIVSHPADN LVSFLNNAKG
301: ATVGDAVKKI GVVGLFTRGL PLRIVMIGTL TGAQWGLYDS FKVFVGLPTT GGSAPAPVR

Best Arabidopsis Sequence Match ( AT5G14040.1 )
(BLAST)

001: MESPKNSLIP SFLYSSSSSP RSFLLDQVLN SNSNAAFEKS PSPAPRSSPT SMISRKNFLI ASPTEPGKGI EMYSPAFYAA CTFGGILSCG LTHMTVTPLD
101: LVKCNMQIDP AKYKSISSGF GILLKEQGVK GFFRGWVPTL LGYSAQGACK FGFYEYFKKT YSDLAGPEYT AKYKTLIYLA GSASAEIIAD IALCPFEAVK
201: VRVQTQPGFA RGMSDGFPKF IKSEGYGGLY KGLAPLWGRQ IPYTMMKFAS FETIVEMIYK YAIPNPKSEC SKGLQLGVSF AGGYVAGVFC AIVSHPADNL
301: VSFLNNAKGA TVGDAVKKIG MVGLFTRGLP LRIVMIGTLT GAQWGLYDAF KVFVGLPTTG GVAPAPAIAA TEAKA

Arabidopsis Description

MPT3Mitochondrial phosphate carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FMU6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.