Factsheet for TraesCS4A01G088600.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, cytosol

Predictor Summary:

cytosol 1
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion
Any Predictor:	cytosol, extracellular, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G216100.2	Wheat	cytosol, endoplasmic reticulum, mitochondrion	83.83	98.37
TraesCS4B01G215600.2	Wheat	cytosol, endoplasmic reticulum, mitochondrion	83.83	98.37
EER95137	Sorghum	cytosol, mitochondrion, plastid	68.36	79.78
PGSC0003DMT400084471	Potato	cytosol, mitochondrion, plastid	12.93	76.71
Zm00001d028528_P001	Maize	cytosol	66.51	75.39
VIT_17s0000g00400.t01	Wine grape	extracellular	52.66	75.25
GSMUA_Achr10P...	Banana	extracellular, vacuole	51.73	73.44
HORVU4Hr1G061260.1	Barley	cytosol, mitochondrion	84.06	70.27
TraesCS2A01G148500.1	Wheat	cytosol, mitochondrion, plastid	10.16	68.75
Solyc02g094470.2.1	Tomato	plastid	55.43	67.04
VIT_14s0068g01260.t01	Wine grape	plastid	56.12	66.94
PGSC0003DMT400052032	Potato	plastid	55.2	66.2
Solyc03g097840.2.1	Tomato	plastid	53.58	65.91
TraesCS2A01G316900.1	Wheat	mitochondrion, plastid	55.43	64.86
KRH41081	Soybean	plastid	52.42	63.94
PGSC0003DMT400069570	Potato	plastid	52.89	63.79
KRH59763	Soybean	endoplasmic reticulum	52.89	63.79
KRH08401	Soybean	endoplasmic reticulum	51.04	63.14
Solyc06g072510.2.1	Tomato	plastid	52.66	62.98
KRG94676	Soybean	plastid	54.5	62.93
TraesCS6A01G331000.1	Wheat	golgi	54.27	62.17
KRH06851	Soybean	plastid	52.42	61.02
KRH06854	Soybean	endoplasmic reticulum	47.58	60.77
TraesCS5A01G236700.1	Wheat	mitochondrion	48.5	60.69
KRH70059	Soybean	plastid	39.49	58.97
CDY37906	Canola	plastid	48.96	57.92
CDX87003	Canola	plastid	48.73	57.65
AT3G48850.1	Thale cress	plastid	47.58	56.75
Bra019570.1-P	Field mustard	plastid	48.96	53.27
TraesCS5A01G354900.1	Wheat	cytosol	34.64	46.01

Protein Annotations

EnsemblPlants:TraesCS4A01G088600.2	EnsemblPlantsGene:TraesCS4A01G088600	Gene3D:1.50.40.10	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF345	PFAM:PF00153	PFscan:PS50920	SEG:seg
SUPFAM:SSF103506	MapMan:24.2.13	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:94753652..94756899

Molecular Weight (calculated)

46565.4 Da

IEP (calculated)

8.232

GRAVY (calculated)

0.135

Length

433 amino acids

Sequence
(BLAST)

001: MVNRDKAGCP TAAATLPLDR LLASLAANAE QLGKRWEIAV RDRRARAAER RMEADAAPPV QLHTPLFYAT CALGGVLSTG LTHLAVTPLD LVKCNMQVSE
101: AETGSPAAPV QASCALMLIS NGNCSSQVDP SKYRDISSGF GVLLQEQGLG GFFKGWMATL VGYSSQGACK FGFYEYFKKC YSDIAGPENA DRLKTVIYLA
201: ASASAEVIAD LALCPMEAVK VRIQTQPGFA RCLTDGLPKL VRSEGAFGYN RYCMSCTDYV MIGSIQDTAE HSLTLCVHFR LYKGIVPLWG RQIPYTMMKF
301: ACFETIVEMV YKHAVPKPKD QCSKPLQLAV SFAGGYIAGV LCAAVSHPAD NLVSFLNNAK GATVADAITT IGLWGLFTRG LPLRIIMVGT LTGAQWATYD
401: AFKVFVGLPT TGGVSSSCHA ATTLHRVDHE KQN

Best Arabidopsis Sequence Match ( AT2G17270.1 )
(BLAST)

001: MTRVKSKLDE ELSSPWFYTV CTMGGMLSAG TTHLAITPLD VLKVNMQVNP VKYNSIPSGF STLLREHGHS YLWRGWSGKL LGYGVQGGCR FGLYEYFKTL
101: YSDVLPNHNR TSIYFLSSAS AQIFADMALC PFEAIKVRVQ TQPMFAKGLL DGFPRVYRSE GLAGFHRGLF PLWCRNLPFS MVMFSTFEQS VEFIYQKIIQ
201: KRKQDCSKAQ QLGVTCLAGY TAGAVGTIIS NPADVVLSSL YNNKAKNVLQ AVRNIGFVGL FTRSLPVRIT IVGPVITLQW FFYDAIKVLS GFPTSGGVKK
301: PVDAAKLSV

Arabidopsis Description

MPT1Mitochondrial phosphate carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q7DNC3]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.