CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 5
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70059	Soybean	plastid	74.57	90.0
Zm00001d052155_P001	Maize	cytosol	28.57	75.76
VIT_14s0068g01260.t01	Wine grape	plastid	74.29	71.63
KRG94676	Soybean	plastid	75.71	70.67
Zm00001d018187_P001	Maize	mitochondrion, plastid	73.71	70.49
Zm00001d018183_P001	Maize	plastid	73.71	70.49
Solyc02g094470.2.1	Tomato	plastid	72.0	70.39
Os02t0767500-01	Rice	mitochondrion	74.0	70.38
EES07586	Sorghum	plastid	74.29	70.08
Os04t0448800-01	Rice	plasma membrane	71.43	69.44
EES10896	Sorghum	plastid	72.0	69.42
KRH41081	Soybean	plastid	70.29	69.3
Os06t0210500-01	Rice	mitochondrion	72.86	69.29
EER88051	Sorghum	plastid	73.43	69.27
PGSC0003DMT400052032	Potato	plastid	71.43	69.25
KRH59763	Soybean	endoplasmic reticulum	70.86	69.08
TraesCS2A01G316900.1	Wheat	mitochondrion, plastid	72.29	68.38
TraesCS3B01G060300.1	Wheat	plastid	70.29	67.77
TraesCS2B01G335500.1	Wheat	plastid	70.86	67.21
TraesCS2D01G314800.1	Wheat	mitochondrion, plastid	70.57	67.12
KRH06851	Soybean	plastid	71.14	66.94
KRH06854	Soybean	endoplasmic reticulum	64.57	66.67
TraesCS6D01G310300.1	Wheat	golgi, plastid, unclear	70.86	66.13
TraesCS6A01G331000.1	Wheat	golgi	71.14	65.87
TraesCS6B01G361800.1	Wheat	golgi	70.57	65.52
TraesCS4B01G215600.2	Wheat	cytosol, endoplasmic reticulum, mitochondrion	63.14	59.89
TraesCS4D01G216100.2	Wheat	cytosol, endoplasmic reticulum, mitochondrion	63.14	59.89
HORVU2Hr1G078800.1	Barley	cytosol, mitochondrion, plastid	72.0	59.57
EER95137	Sorghum	cytosol, mitochondrion, plastid	62.0	58.49
Zm00001d028528_P001	Maize	cytosol	61.43	56.28
HORVU6Hr1G080480.4	Barley	mitochondrion	68.57	55.43
TraesCS4A01G088600.2	Wheat	cytosol, extracellular, mitochondrion	63.14	51.04
KRH76514	Soybean	cytosol, mitochondrion, nucleus	38.29	43.79
KRH28949	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	38.0	43.46
HORVU4Hr1G061260.1	Barley	cytosol, mitochondrion	63.14	42.66

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100804257	MapMan:24.2.13	EMBL:ACUP02010169	EnsemblPlantsGene:GLYMA_16G146700	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628
GO:GO:0009651	GO:GO:0015114	GO:GO:0016020	GO:GO:0016021	GO:GO:0035435	UniProt:I1MNN5
InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KRH08401	ProteinID:KRH08401	ProteinID:KRH08401.1	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF460	SUPFAM:SSF103506
UniParc:UPI000233BD3F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:30755899..30759360

Molecular Weight (calculated)

37650.7 Da

IEP (calculated)

9.480

GRAVY (calculated)

0.101

Length

350 amino acids

Sequence
(BLAST)

001: MAPVDSDTLG RHSLIPSYLY SSPSPQKKKM EASSFAIHSP RENRNIEMFS PSFYAACTVG GSLSCGPTHT GITPLDVVKC NIQIDPVKYK NTSTGFGVMF
101: EEQGLRGFFR GWGPTLVGYS AQGAFKYGFY EFFKKYYSDI AGPEYATKYK TLIYLAGSAS AELIAGVALC PFEAVKVRVQ TQPGFARGLA DGLPKLVRTE
201: GVSGLYKGIV PLWGRQVPYT MMKFASYENI VEMIYKHAIP KPKYECSNSL QLGVSIVSGY MAGILCATVS HPADNLVSFL NNSKGATVGD AVKKLGLWGL
301: FTRGLPLRIL MVGTLTGAQW GIYDSFKVFV GLPTTGGVAP AAVLAPASAA

Best Arabidopsis Sequence Match ( AT2G17270.1 )
(BLAST)

001: MTRVKSKLDE ELSSPWFYTV CTMGGMLSAG TTHLAITPLD VLKVNMQVNP VKYNSIPSGF STLLREHGHS YLWRGWSGKL LGYGVQGGCR FGLYEYFKTL
101: YSDVLPNHNR TSIYFLSSAS AQIFADMALC PFEAIKVRVQ TQPMFAKGLL DGFPRVYRSE GLAGFHRGLF PLWCRNLPFS MVMFSTFEQS VEFIYQKIIQ
201: KRKQDCSKAQ QLGVTCLAGY TAGAVGTIIS NPADVVLSSL YNNKAKNVLQ AVRNIGFVGL FTRSLPVRIT IVGPVITLQW FFYDAIKVLS GFPTSGGVKK
301: PVDAAKLSV

Arabidopsis Description

MPT1Mitochondrial phosphate carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q7DNC3]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.