Factsheet for TraesCS6B01G361800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 5
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

golgi: 23128297
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G331000.1	Wheat	golgi	98.41	98.15
TraesCS6D01G310300.1	Wheat	golgi, plastid, unclear	97.61	98.13
Zm00001d052155_P001	Maize	cytosol	30.77	87.88
Zm00001d018183_P001	Maize	plastid	84.62	87.16
Zm00001d018187_P001	Maize	mitochondrion, plastid	84.35	86.89
Os02t0767500-01	Rice	mitochondrion	84.62	86.68
EES07586	Sorghum	plastid	85.15	86.52
VIT_17s0000g00400.t01	Wine grape	extracellular	65.78	81.85
Solyc02g094470.2.1	Tomato	plastid	77.72	81.84
TraesCS3B01G060300.1	Wheat	plastid	78.78	81.82
PGSC0003DMT400052032	Potato	plastid	77.45	80.89
VIT_14s0068g01260.t01	Wine grape	plastid	76.39	79.34
GSMUA_Achr3P07040_001	Banana	cytosol	65.78	78.73
GSMUA_Achr10P...	Banana	cytosol, plastid	77.19	78.44
GSMUA_Achr7P13050_001	Banana	cytosol	76.13	78.42
KRG94676	Soybean	plastid	77.45	77.87
TraesCS2B01G335500.1	Wheat	plastid	75.86	77.51
Solyc03g097840.2.1	Tomato	plastid	72.15	77.27
GSMUA_Achr7P18860_001	Banana	cytosol	77.19	77.19
KRH41081	Soybean	plastid	72.68	77.18
PGSC0003DMT400069570	Potato	plastid	73.47	77.16
HORVU6Hr1G080480.4	Barley	mitochondrion	87.8	76.44
KRH59763	Soybean	endoplasmic reticulum	72.41	76.04
Solyc06g072510.2.1	Tomato	plastid	72.41	75.41
PGSC0003DMT400084471	Potato	cytosol, mitochondrion, plastid	14.59	75.34
KRH06851	Soybean	plastid	72.94	73.92
KRH06854	Soybean	endoplasmic reticulum	65.52	72.86
TraesCS5B01G236300.1	Wheat	plastid	64.99	70.81
KRH08401	Soybean	endoplasmic reticulum	65.52	70.57
GSMUA_Achr9P15350_001	Banana	mitochondrion	77.45	68.54
KRH70059	Soybean	plastid	51.99	67.59
CDY37906	Canola	plastid	64.46	66.39
AT3G48850.1	Thale cress	plastid	63.93	66.39
CDX87003	Canola	plastid	64.19	66.12
TraesCS4B01G215600.2	Wheat	cytosol, endoplasmic reticulum, mitochondrion	61.8	63.14
Bra019570.1-P	Field mustard	plastid	64.46	61.06
TraesCS5B01G357100.1	Wheat	cytosol, mitochondrion, plastid	39.26	45.12

Protein Annotations

EnsemblPlants:TraesCS6B01G361800.1	EnsemblPlantsGene:TraesCS6B01G361800	Gene3D:1.50.40.10	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF635	PFAM:PF00153	PFscan:PS50920	SEG:seg
SUPFAM:SSF103506	MapMan:24.2.13	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:633533151..633536320

Molecular Weight (calculated)

39422.0 Da

IEP (calculated)

9.569

GRAVY (calculated)

0.284

Length

377 amino acids

Sequence
(BLAST)

001: MALSDLSRDS LLPSFLYSSR SFAAAAPRFP SSPSPYQAPA SPAAAPAAGL VGAGGVGGGR PFSIRAPNEK IVMYSPAFYA ACTAGGIASC GLTHMAVTPL
101: DLVKCNMQID PAKYKSITSG FGVLFKEQGA RGFFRGWVPT LLGYSAQGAC KFGFYEFFKK TYSDMAGPEN AVKYKTLIYL AGSASAEVIA DIALCPFEAV
201: KVRVQTQPGF ARGLSDGLPK FIKAEGAAGL YKGIVPLWGR QIPYTMMKFA SFETIVELIY KHAVPVPKAE CSKSSQLGIS FAGGYIAGVF CAIVSHPADN
301: LVSFLNNAKG ATVGDAVNKI GMLGLFTRGL PLRIVMIGTL TGAQWGIYDA FKVMVGLPTT GGAPPVAPVE EAAKASA

Best Arabidopsis Sequence Match ( AT5G14040.1 )
(BLAST)

001: MESPKNSLIP SFLYSSSSSP RSFLLDQVLN SNSNAAFEKS PSPAPRSSPT SMISRKNFLI ASPTEPGKGI EMYSPAFYAA CTFGGILSCG LTHMTVTPLD
101: LVKCNMQIDP AKYKSISSGF GILLKEQGVK GFFRGWVPTL LGYSAQGACK FGFYEYFKKT YSDLAGPEYT AKYKTLIYLA GSASAEIIAD IALCPFEAVK
201: VRVQTQPGFA RGMSDGFPKF IKSEGYGGLY KGLAPLWGRQ IPYTMMKFAS FETIVEMIYK YAIPNPKSEC SKGLQLGVSF AGGYVAGVFC AIVSHPADNL
301: VSFLNNAKGA TVGDAVKKIG MVGLFTRGLP LRIVMIGTLT GAQWGLYDAF KVFVGLPTTG GVAPAPAIAA TEAKA

Arabidopsis Description

MPT3Mitochondrial phosphate carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FMU6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.