Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
22908117
plastid: 26371478 unclear: 26455813 |
msms PMID:
22908117
doi
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID:
26371478
doi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069570 | Potato | plastid | 96.96 | 97.77 |
| VIT_17s0000g00400.t01 | Wine grape | extracellular | 71.82 | 85.81 |
| Solyc03g097840.2.1 | Tomato | plastid | 80.11 | 82.39 |
| Solyc02g094470.2.1 | Tomato | plastid | 77.07 | 77.93 |
| KRH41081 | Soybean | plastid | 75.69 | 77.18 |
| KRH59763 | Soybean | endoplasmic reticulum | 75.69 | 76.32 |
| Os04t0448800-01 | Rice | plasma membrane | 75.69 | 76.11 |
| Zm00001d052155_P001 | Maize | cytosol | 27.62 | 75.76 |
| Zm00001d018187_P001 | Maize | mitochondrion, plastid | 76.52 | 75.68 |
| Zm00001d018183_P001 | Maize | plastid | 76.52 | 75.68 |
| EES10896 | Sorghum | plastid | 75.41 | 75.21 |
| EES07586 | Sorghum | plastid | 77.07 | 75.2 |
| Os02t0767500-01 | Rice | mitochondrion | 75.97 | 74.73 |
| TraesCS2A01G316900.1 | Wheat | mitochondrion, plastid | 76.24 | 74.59 |
| TraesCS2D01G314800.1 | Wheat | mitochondrion, plastid | 75.41 | 74.18 |
| TraesCS2B01G335500.1 | Wheat | plastid | 75.41 | 73.98 |
| EER88051 | Sorghum | plastid | 75.14 | 73.32 |
| TraesCS3B01G060300.1 | Wheat | plastid | 73.48 | 73.28 |
| Os06t0210500-01 | Rice | mitochondrion | 74.03 | 72.83 |
| TraesCS6D01G310300.1 | Wheat | golgi, plastid, unclear | 75.41 | 72.8 |
| TraesCS6A01G331000.1 | Wheat | golgi | 75.69 | 72.49 |
| TraesCS6B01G361800.1 | Wheat | golgi | 75.41 | 72.41 |
| AT3G48850.1 | Thale cress | plastid | 66.3 | 66.12 |
| CDX87003 | Canola | plastid | 66.3 | 65.57 |
| CDY37906 | Canola | plastid | 66.3 | 65.57 |
| HORVU2Hr1G078800.1 | Barley | cytosol, mitochondrion, plastid | 75.97 | 65.01 |
| TraesCS4B01G215600.2 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 63.26 | 62.06 |
| TraesCS4D01G216100.2 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 63.26 | 62.06 |
| HORVU6Hr1G080480.4 | Barley | mitochondrion | 73.48 | 61.43 |
| EER95137 | Sorghum | cytosol, mitochondrion, plastid | 61.88 | 60.38 |
| Bra019570.1-P | Field mustard | plastid | 66.3 | 60.3 |
| Zm00001d028528_P001 | Maize | cytosol | 61.05 | 57.85 |
| TraesCS4A01G088600.2 | Wheat | cytosol, extracellular, mitochondrion | 62.98 | 52.66 |
| Solyc03g032030.2.1 | Tomato | cytosol | 42.27 | 47.22 |
| GSMUA_Achr9P27150_001 | Banana | mitochondrion | 29.56 | 46.12 |
| HORVU4Hr1G061260.1 | Barley | cytosol, mitochondrion | 62.98 | 44.02 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006810 | GO:GO:0006839 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0015114 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0035435 | InterPro:IPR018108 | InterPro:IPR023395 | UniProt:K4C8X1 | InterPro:Mitochondrial_sb/sol_carrier |
| InterPro:Mt_carrier_dom_sf | PFAM:PF00153 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF460 | SUPFAM:SSF103506 |
| EnsemblPlantsGene:Solyc06g072510.2 | EnsemblPlants:Solyc06g072510.2.1 | UniParc:UPI000276599E | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6:+:44717671..44719875
Molecular Weight (calculated)
38666.0 Da
IEP (calculated)
9.439
GRAVY (calculated)
0.132
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYTDNSSSR TPLIPNFLYN TASSSSFSSS TIITNNTLSQ PCNESIVKKP VLVAAPKEPS RKIEMFSPAY YGACTFGGVM SCGLTHMAVT PLDLVKCNMQ
101: IDPAKYKSIS SGFGVLLKEQ GARGFFRGWV PTLLGYSAQG ACKYGFYEYF KKYYTDLAGP ENAAKYKTLI FLAGSASAEV IADVALCPFE AVKVRVQTQP
201: GFARGLSDGL PKFVRAEGAS GLYKGLVPLW GRQIPYTMMK FASFETIVEQ LYKNVIPTPK DQCSKSTQLG VSFAGGYLAG ILCAIVSHPA DNLVSFLNNA
301: KGATVGDAVN KLGVMGLCTR GLPIRIVMIG TLTGAQWGIY DSFKVFVGLP TTGGAAPPAP VK
101: IDPAKYKSIS SGFGVLLKEQ GARGFFRGWV PTLLGYSAQG ACKYGFYEYF KKYYTDLAGP ENAAKYKTLI FLAGSASAEV IADVALCPFE AVKVRVQTQP
201: GFARGLSDGL PKFVRAEGAS GLYKGLVPLW GRQIPYTMMK FASFETIVEQ LYKNVIPTPK DQCSKSTQLG VSFAGGYLAG ILCAIVSHPA DNLVSFLNNA
301: KGATVGDAVN KLGVMGLCTR GLPIRIVMIG TLTGAQWGIY DSFKVFVGLP TTGGAAPPAP VK
001: MESPKNSLIP SFLYSSSSSP RSFLLDQVLN SNSNAAFEKS PSPAPRSSPT SMISRKNFLI ASPTEPGKGI EMYSPAFYAA CTFGGILSCG LTHMTVTPLD
101: LVKCNMQIDP AKYKSISSGF GILLKEQGVK GFFRGWVPTL LGYSAQGACK FGFYEYFKKT YSDLAGPEYT AKYKTLIYLA GSASAEIIAD IALCPFEAVK
201: VRVQTQPGFA RGMSDGFPKF IKSEGYGGLY KGLAPLWGRQ IPYTMMKFAS FETIVEMIYK YAIPNPKSEC SKGLQLGVSF AGGYVAGVFC AIVSHPADNL
301: VSFLNNAKGA TVGDAVKKIG MVGLFTRGLP LRIVMIGTLT GAQWGLYDAF KVFVGLPTTG GVAPAPAIAA TEAKA
101: LVKCNMQIDP AKYKSISSGF GILLKEQGVK GFFRGWVPTL LGYSAQGACK FGFYEYFKKT YSDLAGPEYT AKYKTLIYLA GSASAEIIAD IALCPFEAVK
201: VRVQTQPGFA RGMSDGFPKF IKSEGYGGLY KGLAPLWGRQ IPYTMMKFAS FETIVEMIYK YAIPNPKSEC SKGLQLGVSF AGGYVAGVFC AIVSHPADNL
301: VSFLNNAKGA TVGDAVKKIG MVGLFTRGLP LRIVMIGTLT GAQWGLYDAF KVFVGLPTTG GVAPAPAIAA TEAKA
Arabidopsis Description
MPT3Mitochondrial phosphate carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FMU6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.