Factsheet for TraesCS6A01G331000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 5
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G310300.1	Wheat	golgi, plastid, unclear	98.68	99.47
TraesCS6B01G361800.1	Wheat	golgi	98.15	98.41
Zm00001d018183_P001	Maize	plastid	85.19	87.98
Zm00001d052155_P001	Maize	cytosol	30.69	87.88
Zm00001d018187_P001	Maize	mitochondrion, plastid	84.92	87.7
TraesCS2A01G148500.1	Wheat	cytosol, mitochondrion, plastid	14.81	87.5
EES07586	Sorghum	plastid	85.71	87.33
Os02t0767500-01	Rice	mitochondrion	84.66	86.96
Solyc02g094470.2.1	Tomato	plastid	78.57	82.96
VIT_17s0000g00400.t01	Wine grape	extracellular	66.4	82.84
PGSC0003DMT400052032	Potato	plastid	78.31	81.99
VIT_14s0068g01260.t01	Wine grape	plastid	77.25	80.44
GSMUA_Achr10P...	Banana	cytosol, plastid	78.04	79.51
GSMUA_Achr7P13050_001	Banana	cytosol	76.98	79.51
GSMUA_Achr3P07040_001	Banana	cytosol	66.14	79.37
KRG94676	Soybean	plastid	78.04	78.67
TraesCS2A01G316900.1	Wheat	mitochondrion, plastid	76.98	78.65
GSMUA_Achr7P18860_001	Banana	cytosol	77.78	77.98
Solyc03g097840.2.1	Tomato	plastid	72.22	77.56
PGSC0003DMT400069570	Potato	plastid	73.55	77.44
KRH41081	Soybean	plastid	72.22	76.9
PGSC0003DMT400084471	Potato	cytosol, mitochondrion, plastid	14.81	76.71
HORVU6Hr1G080480.4	Barley	mitochondrion	87.57	76.44
KRH59763	Soybean	endoplasmic reticulum	72.49	76.32
Solyc06g072510.2.1	Tomato	plastid	72.49	75.69
KRH06851	Soybean	plastid	73.28	74.46
KRH06854	Soybean	endoplasmic reticulum	65.61	73.16
TraesCS5A01G236700.1	Wheat	mitochondrion	66.14	72.25
KRH08401	Soybean	endoplasmic reticulum	65.87	71.14
GSMUA_Achr9P15350_001	Banana	mitochondrion	77.78	69.01
KRH70059	Soybean	plastid	52.12	67.93
AT3G48850.1	Thale cress	plastid	64.02	66.67
CDY37906	Canola	plastid	64.55	66.67
CDX87003	Canola	plastid	64.29	66.39
Bra019570.1-P	Field mustard	plastid	64.55	61.31
TraesCS4A01G088600.2	Wheat	cytosol, extracellular, mitochondrion	62.17	54.27
TraesCS5A01G354900.1	Wheat	cytosol	39.68	46.01

Protein Annotations

EnsemblPlants:TraesCS6A01G331000.1	EnsemblPlantsGene:TraesCS6A01G331000	Gene3D:1.50.40.10	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF635	PFAM:PF00153	PFscan:PS50920	SEG:seg
SUPFAM:SSF103506	MapMan:24.2.13	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:563374719..563378114

Molecular Weight (calculated)

39541.2 Da

IEP (calculated)

9.564

GRAVY (calculated)

0.274

Length

378 amino acids

Sequence
(BLAST)

001: MALSDLSRDS LLPSFLYSPR SFAAAASPRF PSSPSPYQAP ASPAAAPAAG LVGAGGVGGG RPFSIRAPNE KIEMYSPAFY AACTAGGIAS CGLTHMAVTP
101: LDLVKCNMQI DPAKYKSISS GFGVLLKEQG ARGFFRGWVP TLLGYSAQGA CKFGFYEFFK KTYSDMAGPE NAVKYKTLIY LAGSASAEVI ADIALCPFEA
201: VKVRVQTQPG FARGLSDGLP KFIKAEGAAG LYKGIVPLWG RQIPYTMMKF ASFETIVELI YKHAVPVPKA ECSKSSQLGI SFAGGYIAGV FCAIVSHPAD
301: NLVSFLNNAK GATVGDAVKK IGMLGLFTRG LPLRIVMIGT LTGAQWGIYD AFKVMVGLPT TGGAPPVAPV EEAAKAIA

Best Arabidopsis Sequence Match ( AT5G14040.1 )
(BLAST)

001: MESPKNSLIP SFLYSSSSSP RSFLLDQVLN SNSNAAFEKS PSPAPRSSPT SMISRKNFLI ASPTEPGKGI EMYSPAFYAA CTFGGILSCG LTHMTVTPLD
101: LVKCNMQIDP AKYKSISSGF GILLKEQGVK GFFRGWVPTL LGYSAQGACK FGFYEYFKKT YSDLAGPEYT AKYKTLIYLA GSASAEIIAD IALCPFEAVK
201: VRVQTQPGFA RGMSDGFPKF IKSEGYGGLY KGLAPLWGRQ IPYTMMKFAS FETIVEMIYK YAIPNPKSEC SKGLQLGVSF AGGYVAGVFC AIVSHPADNL
301: VSFLNNAKGA TVGDAVKKIG MVGLFTRGLP LRIVMIGTLT GAQWGLYDAF KVFVGLPTTG GVAPAPAIAA TEAKA

Arabidopsis Description

MPT3Mitochondrial phosphate carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FMU6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.