CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 6
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94676	Soybean	plastid	89.09	80.53
KRH06851	Soybean	plastid	86.43	78.76
VIT_14s0068g01260.t01	Wine grape	plastid	75.52	70.52
Zm00001d018183_P001	Maize	plastid	75.52	69.95
Solyc02g094470.2.1	Tomato	plastid	73.75	69.83
Zm00001d018187_P001	Maize	mitochondrion, plastid	75.22	69.67
EES07586	Sorghum	plastid	76.11	69.54
PGSC0003DMT400052032	Potato	plastid	74.04	69.53
Zm00001d052155_P001	Maize	cytosol	26.84	68.94
Os02t0767500-01	Rice	mitochondrion	74.63	68.75
Os04t0448800-01	Rice	plasma membrane	71.98	67.78
EES10896	Sorghum	plastid	72.57	67.77
EER88051	Sorghum	plastid	73.45	67.12
Os06t0210500-01	Rice	mitochondrion	72.57	66.85
KRH41081	Soybean	plastid	69.91	66.76
TraesCS3B01G060300.1	Wheat	plastid	71.39	66.67
KRH59763	Soybean	endoplasmic reticulum	70.21	66.3
TraesCS6D01G310300.1	Wheat	golgi, plastid, unclear	73.16	66.13
TraesCS2D01G314800.1	Wheat	mitochondrion, plastid	71.68	66.03
TraesCS2A01G316900.1	Wheat	mitochondrion, plastid	71.98	65.95
TraesCS2B01G335500.1	Wheat	plastid	71.68	65.85
TraesCS6A01G331000.1	Wheat	golgi	73.16	65.61
KRH70059	Soybean	plastid	56.05	65.52
TraesCS6B01G361800.1	Wheat	golgi	72.86	65.52
KRH08401	Soybean	endoplasmic reticulum	66.67	64.57
HORVU2Hr1G078800.1	Barley	cytosol, mitochondrion, plastid	71.98	57.68
EER95137	Sorghum	cytosol, mitochondrion, plastid	61.95	56.6
TraesCS4D01G216100.2	Wheat	cytosol, endoplasmic reticulum, mitochondrion	61.06	56.1
TraesCS4B01G215600.2	Wheat	cytosol, endoplasmic reticulum, mitochondrion	60.77	55.83
HORVU6Hr1G080480.4	Barley	mitochondrion	70.5	55.2
Zm00001d028528_P001	Maize	cytosol	61.06	54.19
TraesCS4A01G088600.2	Wheat	cytosol, extracellular, mitochondrion	60.77	47.58
KRH76514	Soybean	cytosol, mitochondrion, nucleus	37.17	41.18
KRH28949	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	36.87	40.85
HORVU4Hr1G061260.1	Barley	cytosol, mitochondrion	60.77	39.77

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A0R0FLJ8	EMBL:ACUP02009890	EnsemblPlantsGene:GLYMA_16G050100	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628
GO:GO:0009651	GO:GO:0015114	GO:GO:0016020	GO:GO:0016021	GO:GO:0035435	InterPro:IPR018108
InterPro:IPR023395	EnsemblPlants:KRH06854	ProteinID:KRH06854	ProteinID:KRH06854.1	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF460	SUPFAM:SSF103506	UniParc:UPI0006ED8A90
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:4798523..4800531

Molecular Weight (calculated)

36814.0 Da

IEP (calculated)

9.688

GRAVY (calculated)

0.184

Length

339 amino acids

Sequence
(BLAST)

001: MALPDSSSRR NSLIPSFIYS SSSKTLPLHH MLNSASAAAP SPPPENLHAG SRGLVIPSPS ESRKIKIPKM YSLEFYAACA KGGILSCGLT HLAFTPLEIV
101: RCNMQGLKEQ GFRAFFRGWV PTLLGYSAQG ACKFGFYEFF KKYYSDIAGP EYASKYKTLI YLAGSASAEV IADIALCPFE AVKVRVQTQP GFARGLSDGL
201: PKFVRSEGTL GLYKGLVPLW GRQIPYTMMK FASFETIVEL IYKHAIPTPK NECTKGLQLA VSFAAGNIAG VLCAIVSHPA DNLVSFLNNA KGATVGDAVK
301: KLGLWDLFTR GLLFRIVMIG TLTGDQWVIY DALKLFAGL

Best Arabidopsis Sequence Match ( AT2G17270.1 )
(BLAST)

001: MTRVKSKLDE ELSSPWFYTV CTMGGMLSAG TTHLAITPLD VLKVNMQVNP VKYNSIPSGF STLLREHGHS YLWRGWSGKL LGYGVQGGCR FGLYEYFKTL
101: YSDVLPNHNR TSIYFLSSAS AQIFADMALC PFEAIKVRVQ TQPMFAKGLL DGFPRVYRSE GLAGFHRGLF PLWCRNLPFS MVMFSTFEQS VEFIYQKIIQ
201: KRKQDCSKAQ QLGVTCLAGY TAGAVGTIIS NPADVVLSSL YNNKAKNVLQ AVRNIGFVGL FTRSLPVRIT IVGPVITLQW FFYDAIKVLS GFPTSGGVKK
301: PVDAAKLSV

Arabidopsis Description

MPT1Mitochondrial phosphate carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q7DNC3]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.