Factsheet for TraesCS6D01G310300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear, plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid, unclear
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G331000.1	Wheat	golgi	99.47	98.68
TraesCS6B01G361800.1	Wheat	golgi	98.13	97.61
Zm00001d052155_P001	Maize	cytosol	30.93	87.88
Zm00001d018183_P001	Maize	plastid	85.6	87.7
Zm00001d018187_P001	Maize	mitochondrion, plastid	85.33	87.43
Os02t0767500-01	Rice	mitochondrion	85.6	87.23
EES07586	Sorghum	plastid	86.13	87.06
TraesCS2D01G528600.1	Wheat	mitochondrion	15.47	84.06
Solyc02g094470.2.1	Tomato	plastid	78.93	82.68
VIT_17s0000g00400.t01	Wine grape	extracellular	66.67	82.51
PGSC0003DMT400052032	Potato	plastid	78.67	81.72
VIT_14s0068g01260.t01	Wine grape	plastid	77.6	80.17
GSMUA_Achr3P07040_001	Banana	cytosol	66.93	79.68
GSMUA_Achr10P...	Banana	cytosol, plastid	78.4	79.25
GSMUA_Achr7P13050_001	Banana	cytosol	77.07	78.96
KRG94676	Soybean	plastid	78.4	78.4
TraesCS2D01G314800.1	Wheat	mitochondrion, plastid	76.8	78.26
GSMUA_Achr7P18860_001	Banana	cytosol	78.13	77.72
Solyc03g097840.2.1	Tomato	plastid	72.53	77.27
KRH41081	Soybean	plastid	73.07	77.18
PGSC0003DMT400069570	Potato	plastid	73.87	77.16
PGSC0003DMT400084471	Potato	cytosol, mitochondrion, plastid	14.93	76.71
KRH59763	Soybean	endoplasmic reticulum	73.33	76.6
HORVU6Hr1G080480.4	Barley	mitochondrion	88.0	76.21
Solyc06g072510.2.1	Tomato	plastid	72.8	75.41
KRH06851	Soybean	plastid	73.87	74.46
KRH06854	Soybean	endoplasmic reticulum	66.13	73.16
TraesCS5D01G243700.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	65.87	72.01
KRH08401	Soybean	endoplasmic reticulum	66.13	70.86
GSMUA_Achr9P15350_001	Banana	mitochondrion	78.13	68.78
KRH70059	Soybean	plastid	52.27	67.59
AT3G48850.1	Thale cress	plastid	64.8	66.94
CDY37906	Canola	plastid	65.33	66.94
CDX87003	Canola	plastid	65.07	66.67
TraesCS4D01G216100.2	Wheat	cytosol, endoplasmic reticulum, mitochondrion	62.67	63.69
Bra019570.1-P	Field mustard	plastid	65.33	61.56
TraesCS5D01G362200.1	Wheat	cytosol, peroxisome, plastid	40.27	46.32

Protein Annotations

EnsemblPlants:TraesCS6D01G310300.1	EnsemblPlantsGene:TraesCS6D01G310300	Gene3D:1.50.40.10	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF635	PFAM:PF00153	PFscan:PS50920	SEG:seg
SUPFAM:SSF103506	MapMan:24.2.13	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:420391065..420394318

Molecular Weight (calculated)

39399.1 Da

IEP (calculated)

9.657

GRAVY (calculated)

0.267

Length

375 amino acids

Sequence
(BLAST)

001: MALSDLSRDS LLPSFLYSPR SFAAAASPRF PSSPSPYQAP AAAPAARLVG AGGVGGGRPF SIRAPNEKIE MYSPAFYAAC TAGGIASCGL THMAVTPLDL
101: VKCNMQIDPA KYKSITSGFG VLLKEQGARG FFRGWVPTLL GYSAQGACKF GFYEFFKKTY SDMAGPENAV KYKTLIYLAG SASAEVIADI ALCPFEAVKV
201: RVQTQPGFAR GLSDGLPKFI KAEGAAGLYK GIVPLWGRQI PYTMMKFASF ETIVELIYKH AVPVPKAECS KSSQLGISFA GGYIAGVFCA IVSHPADNLV
301: SFLNNAKGAT VGDAVKKIGM LGLFTRGLPL RIVMIGTLTG AQWGIYDAFK VMVGLPTTGG APPVAPVEEA AKAIA

Best Arabidopsis Sequence Match ( AT5G14040.1 )
(BLAST)

001: MESPKNSLIP SFLYSSSSSP RSFLLDQVLN SNSNAAFEKS PSPAPRSSPT SMISRKNFLI ASPTEPGKGI EMYSPAFYAA CTFGGILSCG LTHMTVTPLD
101: LVKCNMQIDP AKYKSISSGF GILLKEQGVK GFFRGWVPTL LGYSAQGACK FGFYEYFKKT YSDLAGPEYT AKYKTLIYLA GSASAEIIAD IALCPFEAVK
201: VRVQTQPGFA RGMSDGFPKF IKSEGYGGLY KGLAPLWGRQ IPYTMMKFAS FETIVEMIYK YAIPNPKSEC SKGLQLGVSF AGGYVAGVFC AIVSHPADNL
301: VSFLNNAKGA TVGDAVKKIG MVGLFTRGLP LRIVMIGTLT GAQWGLYDAF KVFVGLPTTG GVAPAPAIAA TEAKA

Arabidopsis Description

MPT3Mitochondrial phosphate carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FMU6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.