CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G17270.1	Thale cress	cytosol, mitochondrion, plastid	92.89	63.43
CDY07867	Canola	cytosol, peroxisome, plastid	92.42	63.11
CDX87998	Canola	cytosol, peroxisome, plastid	91.94	62.78
Bra002048.1-P	Field mustard	plastid	58.77	58.22
CDY66482	Canola	plastid	63.51	54.69
VIT_03s0038g03950.t01	Wine grape	cytosol, peroxisome, plastid	73.93	50.65
GSMUA_Achr1P07210_001	Banana	cytosol	69.67	46.67
TraesCS5A01G354900.1	Wheat	cytosol	70.14	45.4
EER99327	Sorghum	mitochondrion	68.25	45.28
TraesCS5B01G357100.1	Wheat	cytosol, mitochondrion, plastid	70.14	45.12
TraesCS5D01G362200.1	Wheat	cytosol, peroxisome, plastid	69.67	45.09
PGSC0003DMT400038023	Potato	cytosol	65.4	44.66
HORVU5Hr1G079920.2	Barley	cytosol, mitochondrion, plastid	68.72	44.48
HORVU5Hr1G087910.3	Barley	cytosol, mitochondrion	68.72	42.9
Zm00001d006315_P001	Maize	mitochondrion	30.81	37.14
Os09t0554000-01	Rice	cytosol, mitochondrion, plastid	31.28	36.26
CDX69610	Canola	cytosol	47.39	35.71
CDY09847	Canola	cytosol	47.39	35.71
CDX85615	Canola	plastid	50.71	30.06
CDX91085	Canola	plastid	50.71	29.97
CDY37906	Canola	plastid	50.71	29.23
CDX87003	Canola	plastid	50.71	29.23
CDX70537	Canola	plastid	49.76	27.7
CDX78556	Canola	plastid	49.76	27.7

Protein Annotations

EnsemblPlants:CDY52599	EnsemblPlantsGene:GSBRNA2T00007375001	Gene3D:1.50.40.10	GO:A0A078IT47	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF412	PFAM:PF00153	PFscan:PS50920	ProteinID:CDY52599	ProteinID:CDY52599.1	SUPFAM:SSF103506
UniParc:UPI0004EE727F	UniProt:A0A078IT47	MapMan:24.2.13	:	:	:

Description

BnaCnng22780DBnaCnng22780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IT47]

Coordinates

chrLK033107:+:35310..36709

Molecular Weight (calculated)

23097.4 Da

IEP (calculated)

9.935

GRAVY (calculated)

0.280

Length

211 amino acids

Sequence
(BLAST)

001: MGGMISAGTT HLAITPLDVL KVNMQVNPVK YNSIPSGYGI FADMALCPFE AINVRVQTQP MFAKGLLDGF PRVYRNEGLA GFHRGLFPLW CHNLPFSMVM
101: FSTFEQSVEF IYQNIIKKKK QDCSKAQQLG VTCLAGYTAG AVGTVISNPA YVAVRNIGFV GLFTRSLPVR ITIGGPVITL QWFFYDAIKV FSGFPTSRGV
201: QKPVDATKVS V

Best Arabidopsis Sequence Match ( AT2G17270.1 )
(BLAST)

001: MTRVKSKLDE ELSSPWFYTV CTMGGMLSAG TTHLAITPLD VLKVNMQVNP VKYNSIPSGF STLLREHGHS YLWRGWSGKL LGYGVQGGCR FGLYEYFKTL
101: YSDVLPNHNR TSIYFLSSAS AQIFADMALC PFEAIKVRVQ TQPMFAKGLL DGFPRVYRSE GLAGFHRGLF PLWCRNLPFS MVMFSTFEQS VEFIYQKIIQ
201: KRKQDCSKAQ QLGVTCLAGY TAGAVGTIIS NPADVVLSSL YNNKAKNVLQ AVRNIGFVGL FTRSLPVRIT IVGPVITLQW FFYDAIKVLS GFPTSGGVKK
301: PVDAAKLSV

Arabidopsis Description

MPT1Mitochondrial phosphate carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q7DNC3]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.