CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69610	Canola	cytosol	75.35	96.07
CDY09847	Canola	cytosol	75.35	96.07
CDX85615	Canola	plastid	93.84	94.1
Bra023446.1-P	Field mustard	plastid	97.76	93.82
AT5G14040.1	Thale cress	plastid	91.88	87.47
CDX70537	Canola	plastid	92.44	87.07
CDX78556	Canola	plastid	92.16	86.81
TraesCS2A01G148500.1	Wheat	cytosol, mitochondrion, plastid	13.73	76.56
TraesCS2D01G528600.1	Wheat	mitochondrion	14.29	73.91
CDY37906	Canola	plastid	67.51	65.85
CDX87003	Canola	plastid	67.23	65.57
CDY52599	Canola	cytosol	29.97	50.71
CDX87998	Canola	cytosol, peroxisome, plastid	43.14	49.84
CDY07867	Canola	cytosol, peroxisome, plastid	43.14	49.84
CDY66482	Canola	plastid	29.97	43.67
Os03t0263400-01	Rice	plasma membrane	10.08	30.77

Protein Annotations

EnsemblPlants:CDX91085	EnsemblPlantsGene:GSBRNA2T00151863001	Gene3D:1.50.40.10	GO:A0A078DP80	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF460	PFAM:PF00153	PFscan:PS50920
ProteinID:CDX91085	ProteinID:CDX91085.1	SEG:seg	SUPFAM:SSF103506	UniParc:UPI0004EE538E	MapMan:24.2.13

Description

BnaC02g05120D

Coordinates

chrLK031865:+:706413..708552

Molecular Weight (calculated)

38322.7 Da

IEP (calculated)

9.597

GRAVY (calculated)

0.151

Length

357 amino acids

Sequence
(BLAST)

001: MESSKNSLIP SFLYSSSSSP RSVLLDQVLN SNSNAAFQSP NNLEKKSPSP TMPGKGIEMY SRDFYAACTV GGILSCGLTH MAVTPLDLVK CNMQIDPAKY
101: KSISSGFGVL LKEQGVRGFF RGWVPTLLGY SAQGACKFGF YEFFKKYYSD LAGPEFVAKY KTLIYLAGSA SAEVIADVAL CPFEAVKVRV QTQPGFARGM
201: SDGFPKFVKS EGYGGLYKGL APLWGRQIPY TMMKFASFET IVEMIYKYAI PNPKHECSKG LQLGVSFAGG YVAGVFCAIV SHPADNLVSF LNNAKGATVG
301: DAVKKIGMVG LFTRGLPLRI VMIGTLTGAQ WGLYDAFKVF VGLPTTGGVT PVPAAKA

Best Arabidopsis Sequence Match ( AT5G14040.1 )
(BLAST)

001: MESPKNSLIP SFLYSSSSSP RSFLLDQVLN SNSNAAFEKS PSPAPRSSPT SMISRKNFLI ASPTEPGKGI EMYSPAFYAA CTFGGILSCG LTHMTVTPLD
101: LVKCNMQIDP AKYKSISSGF GILLKEQGVK GFFRGWVPTL LGYSAQGACK FGFYEYFKKT YSDLAGPEYT AKYKTLIYLA GSASAEIIAD IALCPFEAVK
201: VRVQTQPGFA RGMSDGFPKF IKSEGYGGLY KGLAPLWGRQ IPYTMMKFAS FETIVEMIYK YAIPNPKSEC SKGLQLGVSF AGGYVAGVFC AIVSHPADNL
301: VSFLNNAKGA TVGDAVKKIG MVGLFTRGLP LRIVMIGTLT GAQWGLYDAF KVFVGLPTTG GVAPAPAIAA TEAKA

Arabidopsis Description

MPT3Mitochondrial phosphate carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FMU6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.