CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006234.1-P	Field mustard	plastid	99.47	99.47
CDX70537	Canola	plastid	98.68	98.68
CDX69610	Canola	cytosol	70.98	96.07
CDY09847	Canola	cytosol	70.98	96.07
CDX85615	Canola	plastid	87.86	93.54
CDX91085	Canola	plastid	86.81	92.16
TraesCS2A01G148500.1	Wheat	cytosol, mitochondrion, plastid	13.19	78.12
TraesCS2D01G528600.1	Wheat	mitochondrion	13.72	75.36
CDY37906	Canola	plastid	64.91	67.21
CDX87003	Canola	plastid	64.64	66.94
CDY52599	Canola	cytosol	27.7	49.76
CDX87998	Canola	cytosol, peroxisome, plastid	40.37	49.51
CDY07867	Canola	cytosol, peroxisome, plastid	40.37	49.51
CDY66482	Canola	plastid	27.7	42.86
Os03t0263400-01	Rice	plasma membrane	9.76	31.62

Protein Annotations

EnsemblPlants:CDX78556	EnsemblPlantsGene:GSBRNA2T00129962001	Gene3D:1.50.40.10	GO:A0A078CN34	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF460	PFAM:PF00153	PFscan:PS50920
ProteinID:CDX78556	ProteinID:CDX78556.1	SEG:seg	SUPFAM:SSF103506	UniParc:UPI0004EEF95D	MapMan:24.2.13

Description

BnaA03g04680D

Coordinates

chrLK031815:-:1286561..1288699

Molecular Weight (calculated)

40508.3 Da

IEP (calculated)

9.568

GRAVY (calculated)

0.161

Length

379 amino acids

Sequence
(BLAST)

001: MESPKHSLIP SFLYSSSSSP RSLLLDQVLN SNSNAAFASS NLEKSPSPSP AKTATMVSRK NFLIASPTEP GKGIEMYSPA FYAACTFGGI LSCGLTHMTV
101: TPLDLVKCNM QIDPTKYKSI SSGFGILMKE QGVKGFFRGW VPTLLGYSAQ GACKFGFYEF FKKYYSDLAG PEYTAKYKTL IYLAGSASAE VIADIALCPF
201: EAVKVRVQTQ PGFARGMSDG FPKFVKSEGY GGLYKGLGPL WGRQIPYTMM KFASFETIVE MIYKYAIPNP KHECSKGLQL GVSFAGGYVA GVFCAIVSHP
301: ADNLVSFLNN AKGATVGDAV KKIGLLGLFT RGLPLRIVMI GTLTGAQWGL YDAFKVFVGL PTTGGVAPAP AIVAAEAKA

Best Arabidopsis Sequence Match ( AT5G14040.1 )
(BLAST)

001: MESPKNSLIP SFLYSSSSSP RSFLLDQVLN SNSNAAFEKS PSPAPRSSPT SMISRKNFLI ASPTEPGKGI EMYSPAFYAA CTFGGILSCG LTHMTVTPLD
101: LVKCNMQIDP AKYKSISSGF GILLKEQGVK GFFRGWVPTL LGYSAQGACK FGFYEYFKKT YSDLAGPEYT AKYKTLIYLA GSASAEIIAD IALCPFEAVK
201: VRVQTQPGFA RGMSDGFPKF IKSEGYGGLY KGLAPLWGRQ IPYTMMKFAS FETIVEMIYK YAIPNPKSEC SKGLQLGVSF AGGYVAGVFC AIVSHPADNL
301: VSFLNNAKGA TVGDAVKKIG MVGLFTRGLP LRIVMIGTLT GAQWGLYDAF KVFVGLPTTG GVAPAPAIAA TEAKA

Arabidopsis Description

MPT3Mitochondrial phosphate carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FMU6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.