CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09847	Canola	cytosol	100.0	100.0
TraesCS2A01G148500.1	Wheat	cytosol, mitochondrion, plastid	17.86	78.12
Bra008784.1-P	Field mustard	plastid	100.0	77.99
CDX85615	Canola	plastid	97.14	76.4
TraesCS2D01G528600.1	Wheat	mitochondrion	18.57	75.36
CDX91085	Canola	plastid	96.07	75.35
AT5G14040.1	Thale cress	plastid	96.07	71.73
CDX70537	Canola	plastid	96.79	71.5
CDX78556	Canola	plastid	96.07	70.98
CDX87003	Canola	plastid	74.29	56.83
CDY37906	Canola	plastid	74.29	56.83
CDY52599	Canola	cytosol	35.71	47.39
CDX87998	Canola	cytosol, peroxisome, plastid	50.0	45.31
CDY07867	Canola	cytosol, peroxisome, plastid	50.0	45.31
CDY66482	Canola	plastid	35.71	40.82
Os03t0263400-01	Rice	plasma membrane	6.43	15.38

Protein Annotations

EnsemblPlants:CDX69610	EnsemblPlantsGene:GSBRNA2T00135625001	Gene3D:1.50.40.10	GO:A0A078F9T8	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF460	PFAM:PF00153	PFscan:PS50920	ProteinID:CDX69610	ProteinID:CDX69610.1	ProteinID:CDY09847.1
SEG:seg	SUPFAM:SSF103506	UniParc:UPI0004EED005	UniProt:A0A078F9T8	MapMan:24.2.13	:

Description

BnaA10g19590DBnaA10g19590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9T8]

Coordinates

chrLK031790:+:995001..997084

Molecular Weight (calculated)

30036.9 Da

IEP (calculated)

9.577

GRAVY (calculated)

0.286

Length

280 amino acids

Sequence
(BLAST)

001: MTVTPLDLVK CNMQIDPAKY KSISSGFGIL LKEQGVKGFF RGWVPTLLGY SAQGACKFGF YEFFKKYYSD LAGPEFAAKY KTLIYLAGSA SAEVIADVAL
101: CPFEAVKVRV QTQPGFARGM SDGFPKFVKS EGYGGLYKGL APLWGRQIPY TMMKFASFET IVEMIYKYAI PNPKHECSKG LQLGVSFAGG YVAGVFCAIV
201: SHPADNLVSF LNNAKGATVG DAVKKIGMVG LFTRGLPLRI VMIGTLTGAQ WGLYDAFKVF VGLPTTGGVT PAPVIAAAEA

Best Arabidopsis Sequence Match ( AT2G17270.1 )
(BLAST)

001: MTRVKSKLDE ELSSPWFYTV CTMGGMLSAG TTHLAITPLD VLKVNMQVNP VKYNSIPSGF STLLREHGHS YLWRGWSGKL LGYGVQGGCR FGLYEYFKTL
101: YSDVLPNHNR TSIYFLSSAS AQIFADMALC PFEAIKVRVQ TQPMFAKGLL DGFPRVYRSE GLAGFHRGLF PLWCRNLPFS MVMFSTFEQS VEFIYQKIIQ
201: KRKQDCSKAQ QLGVTCLAGY TAGAVGTIIS NPADVVLSSL YNNKAKNVLQ AVRNIGFVGL FTRSLPVRIT IVGPVITLQW FFYDAIKVLS GFPTSGGVKK
301: PVDAAKLSV

Arabidopsis Description

MPT1Mitochondrial phosphate carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q7DNC3]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.