CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69610	Canola	cytosol	76.4	97.14
CDY09847	Canola	cytosol	76.4	97.14
Bra023446.1-P	Field mustard	plastid	99.72	95.43
CDX91085	Canola	plastid	94.1	93.84
AT5G14040.1	Thale cress	plastid	93.54	88.8
CDX70537	Canola	plastid	93.82	88.13
CDX78556	Canola	plastid	93.54	87.86
TraesCS2A01G148500.1	Wheat	cytosol, mitochondrion, plastid	14.04	78.12
TraesCS2D01G528600.1	Wheat	mitochondrion	14.61	75.36
CDY37906	Canola	plastid	68.82	66.94
CDX87003	Canola	plastid	68.54	66.67
CDY52599	Canola	cytosol	30.06	50.71
CDX87998	Canola	cytosol, peroxisome, plastid	43.26	49.84
CDY07867	Canola	cytosol, peroxisome, plastid	43.26	49.84
CDY66482	Canola	plastid	30.06	43.67
Os03t0263400-01	Rice	plasma membrane	10.39	31.62

Protein Annotations

EnsemblPlants:CDX85615	EnsemblPlantsGene:GSBRNA2T00143342001	Gene3D:1.50.40.10	GO:A0A078D8V5	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF460	PFAM:PF00153	PFscan:PS50920
ProteinID:CDX85615	ProteinID:CDX85615.1	SEG:seg	SUPFAM:SSF103506	UniParc:UPI0004EDF59C	MapMan:24.2.13

Description

BnaA02g01980D

Coordinates

chrLK031842:+:876133..878202

Molecular Weight (calculated)

38193.6 Da

IEP (calculated)

9.747

GRAVY (calculated)

0.138

Length

356 amino acids

Sequence
(BLAST)

001: MESSKNSLIP SFLYSSSSSP RSVLLDQKNS PSPSPKTMAS RKNFLIASPT EPGKGIEMYS RDFYAACTVG GILSCGLTHM AVTPLDLVKC NMQIDPAKYK
101: SISSGFGILL KEQGVRGFFR GWVPTLLGYS AQGACKFGFY EFFKKYYSDL AGPEFAAKYK TLIYLAGSAS AEVIADVALC PFEAVKVRVQ TQPGFARGMS
201: DGFPKFVKSE GYGGLYKGLA PLWGRQIPYT MMKFASFETI VEMIYKYAIP NPKHECSKGL QLGVSFAGGY VAGVFCAIVS HPADNLVSFL NNAKGATVGD
301: AVKKIGMVGL FTRGLPLRIV MIGTLTGAQW GLYDAFKVFV GLPTTGGVTP APAAKA

Best Arabidopsis Sequence Match ( AT5G14040.1 )
(BLAST)

001: MESPKNSLIP SFLYSSSSSP RSFLLDQVLN SNSNAAFEKS PSPAPRSSPT SMISRKNFLI ASPTEPGKGI EMYSPAFYAA CTFGGILSCG LTHMTVTPLD
101: LVKCNMQIDP AKYKSISSGF GILLKEQGVK GFFRGWVPTL LGYSAQGACK FGFYEYFKKT YSDLAGPEYT AKYKTLIYLA GSASAEIIAD IALCPFEAVK
201: VRVQTQPGFA RGMSDGFPKF IKSEGYGGLY KGLAPLWGRQ IPYTMMKFAS FETIVEMIYK YAIPNPKSEC SKGLQLGVSF AGGYVAGVFC AIVSHPADNL
301: VSFLNNAKGA TVGDAVKKIG MVGLFTRGLP LRIVMIGTLT GAQWGLYDAF KVFVGLPTTG GVAPAPAIAA TEAKA

Arabidopsis Description

MPT3Mitochondrial phosphate carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FMU6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.