Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78556 | Canola | plastid | 98.68 | 98.68 |
| CDX69610 | Canola | cytosol | 71.5 | 96.79 |
| CDY09847 | Canola | cytosol | 71.5 | 96.79 |
| CDX85615 | Canola | plastid | 88.13 | 93.82 |
| CDX91085 | Canola | plastid | 87.07 | 92.44 |
| TraesCS2A01G148500.1 | Wheat | cytosol, mitochondrion, plastid | 13.19 | 78.12 |
| TraesCS2D01G528600.1 | Wheat | mitochondrion | 13.72 | 75.36 |
| CDY37906 | Canola | plastid | 64.91 | 67.21 |
| CDX87003 | Canola | plastid | 64.64 | 66.94 |
| CDY52599 | Canola | cytosol | 27.7 | 49.76 |
| CDX87998 | Canola | cytosol, peroxisome, plastid | 40.37 | 49.51 |
| CDY07867 | Canola | cytosol, peroxisome, plastid | 40.37 | 49.51 |
| CDY66482 | Canola | plastid | 27.7 | 42.86 |
| Os03t0263400-01 | Rice | plasma membrane | 10.03 | 32.48 |
Protein Annotations
| EnsemblPlants:CDX70537 | EnsemblPlantsGene:GSBRNA2T00140369001 | Gene3D:1.50.40.10 | GO:A0A078C1D5 | InterPro:IPR018108 | InterPro:IPR023395 |
| InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF460 | PFAM:PF00153 | PFscan:PS50920 |
| ProteinID:CDX70537 | ProteinID:CDX70537.1 | SEG:seg | SUPFAM:SSF103506 | UniParc:UPI0004EDF58F | MapMan:24.2.13 |
Description
BnaC03g06210D
Coordinates
chrLK031791:-:920557..922655
Molecular Weight (calculated)
40492.3 Da
IEP (calculated)
9.588
GRAVY (calculated)
0.173
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSPKHSLIP SFLYSSSSSP RSLLLDQVLN SNSNAAFAST NLEKSPSPSP AKTTTMVSRK NFLIASPTEP GKGIEMYSPA FYAACTFGGI LSCGLTHMTV
101: TPLDLVKCNM QIDPAKYKSI SSGFGILMKE QGVKGFFRGW VPTLLGYSAQ GACKFGFYEF FKKYYSDLAG PEFTAKYKTL IYLAGSASAE VIADIALCPF
201: EAVKVRVQTQ PGFARGMSDG FPKFVKSEGY GGLYKGLGPL WGRQIPYTMM KFASFETIVE MIYKYAIPNP KHECSKGLQL GVSFAGGYVA GVFCAIVSHP
301: ADNLVSFLNN AKGATVGDAV KKIGLLGLFT RGLPLRIVMI GTLTGAQWGL YDAFKVFVGL PTTGGVAPAP AIVAAEAKA
101: TPLDLVKCNM QIDPAKYKSI SSGFGILMKE QGVKGFFRGW VPTLLGYSAQ GACKFGFYEF FKKYYSDLAG PEFTAKYKTL IYLAGSASAE VIADIALCPF
201: EAVKVRVQTQ PGFARGMSDG FPKFVKSEGY GGLYKGLGPL WGRQIPYTMM KFASFETIVE MIYKYAIPNP KHECSKGLQL GVSFAGGYVA GVFCAIVSHP
301: ADNLVSFLNN AKGATVGDAV KKIGLLGLFT RGLPLRIVMI GTLTGAQWGL YDAFKVFVGL PTTGGVAPAP AIVAAEAKA
001: MESPKNSLIP SFLYSSSSSP RSFLLDQVLN SNSNAAFEKS PSPAPRSSPT SMISRKNFLI ASPTEPGKGI EMYSPAFYAA CTFGGILSCG LTHMTVTPLD
101: LVKCNMQIDP AKYKSISSGF GILLKEQGVK GFFRGWVPTL LGYSAQGACK FGFYEYFKKT YSDLAGPEYT AKYKTLIYLA GSASAEIIAD IALCPFEAVK
201: VRVQTQPGFA RGMSDGFPKF IKSEGYGGLY KGLAPLWGRQ IPYTMMKFAS FETIVEMIYK YAIPNPKSEC SKGLQLGVSF AGGYVAGVFC AIVSHPADNL
301: VSFLNNAKGA TVGDAVKKIG MVGLFTRGLP LRIVMIGTLT GAQWGLYDAF KVFVGLPTTG GVAPAPAIAA TEAKA
101: LVKCNMQIDP AKYKSISSGF GILLKEQGVK GFFRGWVPTL LGYSAQGACK FGFYEYFKKT YSDLAGPEYT AKYKTLIYLA GSASAEIIAD IALCPFEAVK
201: VRVQTQPGFA RGMSDGFPKF IKSEGYGGLY KGLAPLWGRQ IPYTMMKFAS FETIVEMIYK YAIPNPKSEC SKGLQLGVSF AGGYVAGVFC AIVSHPADNL
301: VSFLNNAKGA TVGDAVKKIG MVGLFTRGLP LRIVMIGTLT GAQWGLYDAF KVFVGLPTTG GVAPAPAIAA TEAKA
Arabidopsis Description
MPT3Mitochondrial phosphate carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FMU6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.