Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH05344 | Soybean | plasma membrane | 63.13 | 63.94 |
| VIT_04s0008g06500.t01 | Wine grape | plasma membrane | 63.89 | 63.89 |
| PGSC0003DMT400062155 | Potato | plasma membrane | 62.88 | 63.68 |
| KRH15685 | Soybean | golgi, nucleus, plasma membrane | 50.51 | 51.68 |
| VIT_11s0118g00270.t01 | Wine grape | extracellular | 8.84 | 49.3 |
| VIT_07s0005g06440.t01 | Wine grape | plasma membrane | 23.99 | 21.84 |
Protein Annotations
| EntrezGene:100247496 | wikigene:100247496 | MapMan:24.2.1.7 | EMBL:AM451833 | ProteinID:CAN83011 | ProteinID:CAN83011.1 |
| ProteinID:CBI21161 | ProteinID:CBI21161.3 | UniProt:D7SV62 | InterPro:EamA_dom | EMBL:FN595231 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100247496 | wikigene:LOC100247496 |
| PFAM:PF00892 | PANTHER:PTHR23051 | PANTHER:PTHR23051:SF2 | SUPFAM:SSF103481 | TIGR:TC58990 | TIGR:TC67445 |
| TMHMM:TMhelix | UniParc:UPI00015C8D92 | ArrayExpress:VIT_04s0008g06890 | EnsemblPlantsGene:VIT_04s0008g06890 | EnsemblPlants:VIT_04s0008g06890.t01 | unigene:Vvi.386 |
| RefSeq:XP_002285575 | RefSeq:XP_002285575.1 | RefSeq:XP_003631766 | RefSeq:XP_003631766.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr4:-:6915671..6921266
Molecular Weight (calculated)
43083.1 Da
IEP (calculated)
4.553
GRAVY (calculated)
0.447
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MGWKYKAGLG LIGTVVFIWV ASAEITQRIF SEYKQPFALT YLGVSLMVVY LPIAVLKDWI CSRLDINSFK NLCNGSTIAK SSAGLAIPLR INEICPSSET
101: DTESSLNTDM DLSENEDGWL IITNMEDEVG LLEKNHELSS WEIAKCGFYL APIWFITEYS SNSALANTSV ASTTVLTSTS GLFTLFFGAL LGQDTVNITK
201: VVAVFISMAG VAMTTVGKTW APDEMLSASE SRKHSIIGDI FGLLSAVSYG LFTVLLKRSA GSEGDKADVQ KFFGYIGLFT LLGFWWLAWP LNAVGIEPQF
301: KLPHSTSIGE VVLLNGFVGS VLSDYFWALS VVWTTPLVAT LGMSLTIPLA MIADMMIHGR GYSAVYIFGC IEVFAGFVIA NLSDKFSPKA ESSYSN
101: DTESSLNTDM DLSENEDGWL IITNMEDEVG LLEKNHELSS WEIAKCGFYL APIWFITEYS SNSALANTSV ASTTVLTSTS GLFTLFFGAL LGQDTVNITK
201: VVAVFISMAG VAMTTVGKTW APDEMLSASE SRKHSIIGDI FGLLSAVSYG LFTVLLKRSA GSEGDKADVQ KFFGYIGLFT LLGFWWLAWP LNAVGIEPQF
301: KLPHSTSIGE VVLLNGFVGS VLSDYFWALS VVWTTPLVAT LGMSLTIPLA MIADMMIHGR GYSAVYIFGC IEVFAGFVIA NLSDKFSPKA ESSYSN
001: MGWRYKAGLF LIGTVVIIWV TSAEVTQDIF TAYKQPFAVT YLGASLMIVY LPVAFLKDWL CRYLDRRSSK SNKIPALTDD SSVELGSPLR HKIIEMGLQG
101: TITKKDSEEH LSSHEEEDER PLIGKVREEV QTLKQRKEIT TKQIAMYGLY LAPIWFVTEY LSNAALARTS VASTTVLSST SGLFTLFIGV FLGQDTLNLS
201: KVVAVFVSMA GVVMTTLGKT WASDESQLNS SLNGERSLMG DLFGLLSAVS YGLFTVLLKK FAGEEGEGVD VQKLFGYIGL FTLVALWWLV WPLTALGIEP
301: KFTIPHSVKV DEVVLANGFI GSVLSDYFWA LSVVWTTPLV ATLGMSLTIP LAMVADMMIH GRHYSAIYIL GSTQVFAGFV IANISDLFSK KLGL
101: TITKKDSEEH LSSHEEEDER PLIGKVREEV QTLKQRKEIT TKQIAMYGLY LAPIWFVTEY LSNAALARTS VASTTVLSST SGLFTLFIGV FLGQDTLNLS
201: KVVAVFVSMA GVVMTTLGKT WASDESQLNS SLNGERSLMG DLFGLLSAVS YGLFTVLLKK FAGEEGEGVD VQKLFGYIGL FTLVALWWLV WPLTALGIEP
301: KFTIPHSVKV DEVVLANGFI GSVLSDYFWA LSVVWTTPLV ATLGMSLTIP LAMVADMMIH GRHYSAIYIL GSTQVFAGFV IANISDLFSK KLGL
Arabidopsis Description
AT4g32140/F10N7_50 [Source:UniProtKB/TrEMBL;Acc:O49378]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.