Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026442_P001 | Maize | plasma membrane | 56.34 | 13.47 |
| GSMUA_Achr3P19860_001 | Banana | plasma membrane | 60.56 | 10.78 |
| Os04t0645600-01 | Rice | plasma membrane | 59.15 | 10.61 |
| VIT_04s0008g06500.t01 | Wine grape | plasma membrane | 59.15 | 10.61 |
| EES12961 | Sorghum | plasma membrane | 57.75 | 10.3 |
| Zm00001d002087_P001 | Maize | plasma membrane | 57.75 | 10.3 |
| HORVU2Hr1G114380.1 | Barley | plasma membrane | 57.75 | 10.25 |
| TraesCS2B01G545100.1 | Wheat | plasma membrane | 56.34 | 10.05 |
| TraesCS2D01G518100.1 | Wheat | plasma membrane | 56.34 | 10.05 |
| TraesCS2A01G516300.1 | Wheat | plasma membrane | 54.93 | 9.82 |
| GSMUA_Achr6P02900_001 | Banana | plasma membrane | 59.15 | 9.55 |
| VIT_04s0008g06890.t01 | Wine grape | plasma membrane | 49.3 | 8.84 |
| VIT_07s0005g06440.t01 | Wine grape | plasma membrane | 23.94 | 3.91 |
Protein Annotations
| ArrayExpress:VIT_11s0118g00270 | EMBL:FN595515 | EnsemblPlants:VIT_11s0118g00270.t01 | EnsemblPlantsGene:VIT_11s0118g00270 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR23051 | PANTHER:PTHR23051:SF7 | ProteinID:CCB49912 |
| ProteinID:CCB49912.1 | TMHMM:TMhelix | UniParc:UPI0002108A57 | UniProt:F6HCG6 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr11:+:5942318..5943026
Molecular Weight (calculated)
8061.8 Da
IEP (calculated)
4.307
GRAVY (calculated)
0.248
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MVKDCLLWDQ LYKECLLGGD LFSVLSALTY GLFTVLLKKF AGEEGDRVDV QKLFGNYLLS SFWSDQFQSG L
001: MGWRYKAGLF LIGTVVIIWV TSAEVTQDIF TAYKQPFAVT YLGASLMIVY LPVAFLKDWL CRYLDRRSSK SNKIPALTDD SSVELGSPLR HKIIEMGLQG
101: TITKKDSEEH LSSHEEEDER PLIGKVREEV QTLKQRKEIT TKQIAMYGLY LAPIWFVTEY LSNAALARTS VASTTVLSST SGLFTLFIGV FLGQDTLNLS
201: KVVAVFVSMA GVVMTTLGKT WASDESQLNS SLNGERSLMG DLFGLLSAVS YGLFTVLLKK FAGEEGEGVD VQKLFGYIGL FTLVALWWLV WPLTALGIEP
301: KFTIPHSVKV DEVVLANGFI GSVLSDYFWA LSVVWTTPLV ATLGMSLTIP LAMVADMMIH GRHYSAIYIL GSTQVFAGFV IANISDLFSK KLGL
101: TITKKDSEEH LSSHEEEDER PLIGKVREEV QTLKQRKEIT TKQIAMYGLY LAPIWFVTEY LSNAALARTS VASTTVLSST SGLFTLFIGV FLGQDTLNLS
201: KVVAVFVSMA GVVMTTLGKT WASDESQLNS SLNGERSLMG DLFGLLSAVS YGLFTVLLKK FAGEEGEGVD VQKLFGYIGL FTLVALWWLV WPLTALGIEP
301: KFTIPHSVKV DEVVLANGFI GSVLSDYFWA LSVVWTTPLV ATLGMSLTIP LAMVADMMIH GRHYSAIYIL GSTQVFAGFV IANISDLFSK KLGL
Arabidopsis Description
AT4g32140/F10N7_50 [Source:UniProtKB/TrEMBL;Acc:O49378]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.