Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12961 | Sorghum | plasma membrane | 94.28 | 70.35 |
| Zm00001d002087_P001 | Maize | plasma membrane | 92.26 | 68.84 |
| Os04t0645600-01 | Rice | plasma membrane | 85.19 | 63.89 |
| TraesCS2B01G545100.1 | Wheat | plasma membrane | 84.18 | 62.81 |
| TraesCS2A01G516300.1 | Wheat | plasma membrane | 83.84 | 62.72 |
| TraesCS2D01G518100.1 | Wheat | plasma membrane | 83.84 | 62.56 |
| HORVU2Hr1G114380.1 | Barley | plasma membrane | 84.18 | 62.5 |
| AT4G32140.1 | Thale cress | plasma membrane | 74.75 | 56.35 |
| VIT_11s0118g00270.t01 | Wine grape | extracellular | 13.47 | 56.34 |
| VIT_04s0008g06500.t01 | Wine grape | plasma membrane | 74.07 | 55.56 |
| KRH52408 | Soybean | plasma membrane | 73.06 | 55.08 |
| KRH61738 | Soybean | plasma membrane | 72.05 | 54.45 |
| KRH15833 | Soybean | plasma membrane | 71.04 | 53.69 |
| Solyc08g021960.2.1 | Tomato | plasma membrane | 70.71 | 53.44 |
| KRH05190 | Soybean | plasma membrane | 70.37 | 53.18 |
| GSMUA_Achr3P19860_001 | Banana | plasma membrane | 68.01 | 50.63 |
| Bra040066.1-P | Field mustard | plasma membrane | 72.73 | 48.98 |
| CDY23320 | Canola | plasma membrane | 72.73 | 48.87 |
| GSMUA_Achr6P02900_001 | Banana | plasma membrane | 68.69 | 46.36 |
| PGSC0003DMT400062155 | Potato | plasma membrane | 57.24 | 43.48 |
| Zm00001d014470_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 23.23 | 25.84 |
| Zm00001d014469_P001 | Maize | extracellular | 10.1 | 19.74 |
| Zm00001d036564_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 26.6 | 17.52 |
| Zm00001d014468_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 26.94 | 17.39 |
Protein Annotations
| EnsemblPlants:Zm00001d026442_P001 | EnsemblPlants:Zm00001d026442_T001 | EnsemblPlantsGene:Zm00001d026442 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:EamA_dom | PANTHER:PTHR23051 | PANTHER:PTHR23051:SF7 | PFAM:PF00892 | ProteinID:AQK46658.1 | SEG:seg |
| SignalP:SignalP-TM | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI00084335D3 | UniProt:A0A1D6JFZ5 | MapMan:24.2.1.7 |
Description
EamA-like transporter family
Coordinates
chr10:-:145903057..145906518
Molecular Weight (calculated)
32109.7 Da
IEP (calculated)
6.256
GRAVY (calculated)
0.771
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSFKYRAG LCLIVAVVLI WVISAEVTQD KQLSTKEIAT YGLYLCPLWF VTEYLSNAAL ARTSVASTTV LSSTSGLFTL FIGVLLGQDS ISASKVIAVF
101: ISMAGVVMTT MGQTWASDES EVGKSGATQR TLLGDMFGFM SAIAYGLFTV LLKKFCGEEG EKVDVQKLFG YLGLFTLVAL WWIVWPLTAL GIEPKFSMPH
201: SAKVDEVVVA NSLIGSVLSD YFWLTVELMA RALSVVWTTP LVATLGMSLT IPLAMVADMI IHGRHYSAVY ILCSVQVFSG FVIASLADRL SRSLGLL
101: ISMAGVVMTT MGQTWASDES EVGKSGATQR TLLGDMFGFM SAIAYGLFTV LLKKFCGEEG EKVDVQKLFG YLGLFTLVAL WWIVWPLTAL GIEPKFSMPH
201: SAKVDEVVVA NSLIGSVLSD YFWLTVELMA RALSVVWTTP LVATLGMSLT IPLAMVADMI IHGRHYSAVY ILCSVQVFSG FVIASLADRL SRSLGLL
001: MGWRYKAGLF LIGTVVIIWV TSAEVTQDIF TAYKQPFAVT YLGASLMIVY LPVAFLKDWL CRYLDRRSSK SNKIPALTDD SSVELGSPLR HKIIEMGLQG
101: TITKKDSEEH LSSHEEEDER PLIGKVREEV QTLKQRKEIT TKQIAMYGLY LAPIWFVTEY LSNAALARTS VASTTVLSST SGLFTLFIGV FLGQDTLNLS
201: KVVAVFVSMA GVVMTTLGKT WASDESQLNS SLNGERSLMG DLFGLLSAVS YGLFTVLLKK FAGEEGEGVD VQKLFGYIGL FTLVALWWLV WPLTALGIEP
301: KFTIPHSVKV DEVVLANGFI GSVLSDYFWA LSVVWTTPLV ATLGMSLTIP LAMVADMMIH GRHYSAIYIL GSTQVFAGFV IANISDLFSK KLGL
101: TITKKDSEEH LSSHEEEDER PLIGKVREEV QTLKQRKEIT TKQIAMYGLY LAPIWFVTEY LSNAALARTS VASTTVLSST SGLFTLFIGV FLGQDTLNLS
201: KVVAVFVSMA GVVMTTLGKT WASDESQLNS SLNGERSLMG DLFGLLSAVS YGLFTVLLKK FAGEEGEGVD VQKLFGYIGL FTLVALWWLV WPLTALGIEP
301: KFTIPHSVKV DEVVLANGFI GSVLSDYFWA LSVVWTTPLV ATLGMSLTIP LAMVADMMIH GRHYSAIYIL GSTQVFAGFV IANISDLFSK KLGL
Arabidopsis Description
AT4g32140/F10N7_50 [Source:UniProtKB/TrEMBL;Acc:O49378]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.