Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G518100.1 | Wheat | plasma membrane | 97.75 | 98.24 |
| TraesCS2B01G545100.1 | Wheat | plasma membrane | 97.75 | 98.24 |
| TraesCS2A01G516300.1 | Wheat | plasma membrane | 97.5 | 98.24 |
| Os04t0645600-01 | Rice | plasma membrane | 86.75 | 87.63 |
| Zm00001d026442_P001 | Maize | plasma membrane | 62.5 | 84.18 |
| EES12961 | Sorghum | plasma membrane | 83.75 | 84.17 |
| Zm00001d002087_P001 | Maize | plasma membrane | 82.0 | 82.41 |
| VIT_04s0008g06500.t01 | Wine grape | plasma membrane | 68.5 | 69.19 |
| KRH52408 | Soybean | plasma membrane | 67.25 | 68.27 |
| AT4G32140.1 | Thale cress | plasma membrane | 66.5 | 67.51 |
| KRH61738 | Soybean | plasma membrane | 66.25 | 67.43 |
| Solyc08g021960.2.1 | Tomato | plasma membrane | 65.5 | 66.67 |
| KRH15833 | Soybean | plasma membrane | 65.25 | 66.41 |
| KRH05190 | Soybean | plasma membrane | 64.5 | 65.65 |
| GSMUA_Achr3P19860_001 | Banana | plasma membrane | 65.0 | 65.16 |
| GSMUA_Achr6P02900_001 | Banana | plasma membrane | 66.25 | 60.23 |
| Bra040066.1-P | Field mustard | plasma membrane | 64.25 | 58.28 |
| CDY23320 | Canola | plasma membrane | 64.25 | 58.14 |
| VIT_11s0118g00270.t01 | Wine grape | extracellular | 10.25 | 57.75 |
| PGSC0003DMT400062155 | Potato | plasma membrane | 50.75 | 51.92 |
| HORVU7Hr1G102150.1 | Barley | cytosol, nucleus | 24.25 | 15.18 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G114380.1 | EnsemblPlantsGene:HORVU2Hr1G114380 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:EamA_dom |
| PANTHER:PTHR23051 | PANTHER:PTHR23051:SF7 | PFAM:PF00892 | SEG:seg | SignalP:SignalP-TM | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI0002950A4F | UniProt:M0X5Q6 | MapMan:24.2.1.7 | : | : |
Description
No Description!
Coordinates
chrchr2H:+:731898235..731902139
Molecular Weight (calculated)
43180.3 Da
IEP (calculated)
6.923
GRAVY (calculated)
0.587
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMAPNLKYR AGLVLIVAVV LIWVTSAEVT QGIFASYKQP FAITYLGASL MVIYIPLAFL KDFIYKLLRG HSGSSKASKI ASKSSFGGSA PVKNGEFQKM
101: LEMEPQKTVV IKITDVDLPV LEETKPLICG IGECEGDVLK EQQLSTKEIA IYGLYLCPIW FVTEYLSNAA LARTSVASTT VLSSTSGLFT LFIGVLLGQD
201: SINAAKVIAV FVSMAGVAMT TMGQTWATDE SEVSNSGATQ RTLLGDMFGL MSAMSYGLFT VLLKKFAGGE GSEKVDVQKL FGFLGLFSLC LLWWLVWPLT
301: ALGIEPKFTM PHSAKVDEVV LANGLIGSVL SDYFWALSVV WTNPLVATLG MSLTIPLAMV ADMVIHGRHY SAVYIFGSVQ VFSGFVIANL ADRVSRFLGL
101: LEMEPQKTVV IKITDVDLPV LEETKPLICG IGECEGDVLK EQQLSTKEIA IYGLYLCPIW FVTEYLSNAA LARTSVASTT VLSSTSGLFT LFIGVLLGQD
201: SINAAKVIAV FVSMAGVAMT TMGQTWATDE SEVSNSGATQ RTLLGDMFGL MSAMSYGLFT VLLKKFAGGE GSEKVDVQKL FGFLGLFSLC LLWWLVWPLT
301: ALGIEPKFTM PHSAKVDEVV LANGLIGSVL SDYFWALSVV WTNPLVATLG MSLTIPLAMV ADMVIHGRHY SAVYIFGSVQ VFSGFVIANL ADRVSRFLGL
001: MGWRYKAGLF LIGTVVIIWV TSAEVTQDIF TAYKQPFAVT YLGASLMIVY LPVAFLKDWL CRYLDRRSSK SNKIPALTDD SSVELGSPLR HKIIEMGLQG
101: TITKKDSEEH LSSHEEEDER PLIGKVREEV QTLKQRKEIT TKQIAMYGLY LAPIWFVTEY LSNAALARTS VASTTVLSST SGLFTLFIGV FLGQDTLNLS
201: KVVAVFVSMA GVVMTTLGKT WASDESQLNS SLNGERSLMG DLFGLLSAVS YGLFTVLLKK FAGEEGEGVD VQKLFGYIGL FTLVALWWLV WPLTALGIEP
301: KFTIPHSVKV DEVVLANGFI GSVLSDYFWA LSVVWTTPLV ATLGMSLTIP LAMVADMMIH GRHYSAIYIL GSTQVFAGFV IANISDLFSK KLGL
101: TITKKDSEEH LSSHEEEDER PLIGKVREEV QTLKQRKEIT TKQIAMYGLY LAPIWFVTEY LSNAALARTS VASTTVLSST SGLFTLFIGV FLGQDTLNLS
201: KVVAVFVSMA GVVMTTLGKT WASDESQLNS SLNGERSLMG DLFGLLSAVS YGLFTVLLKK FAGEEGEGVD VQKLFGYIGL FTLVALWWLV WPLTALGIEP
301: KFTIPHSVKV DEVVLANGFI GSVLSDYFWA LSVVWTTPLV ATLGMSLTIP LAMVADMMIH GRHYSAIYIL GSTQVFAGFV IANISDLFSK KLGL
Arabidopsis Description
AT4g32140/F10N7_50 [Source:UniProtKB/TrEMBL;Acc:O49378]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.