Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G32140.1 | EES05123 | AT1G27300.1 | 21798944 |
| AT4G32140.1 | EES12559 | AT3G60600.1 | 21798944 |
| AT4G32140.1 | EES14570 | AT3G60600.1 | 21798944 |
| AT4G32140.1 | KXG31128 | AT3G60600.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002087_P001 | Maize | plasma membrane | 94.72 | 94.72 |
| Zm00001d026442_P001 | Maize | plasma membrane | 70.35 | 94.28 |
| Os04t0645600-01 | Rice | plasma membrane | 85.43 | 85.86 |
| TraesCS2A01G516300.1 | Wheat | plasma membrane | 84.67 | 84.89 |
| TraesCS2D01G518100.1 | Wheat | plasma membrane | 84.17 | 84.17 |
| TraesCS2B01G545100.1 | Wheat | plasma membrane | 84.17 | 84.17 |
| HORVU2Hr1G114380.1 | Barley | plasma membrane | 84.17 | 83.75 |
| AT4G32140.1 | Thale cress | plasma membrane | 67.09 | 67.77 |
| VIT_04s0008g06500.t01 | Wine grape | plasma membrane | 67.34 | 67.68 |
| Solyc08g021960.2.1 | Tomato | plasma membrane | 65.58 | 66.41 |
| KRH52408 | Soybean | plasma membrane | 65.58 | 66.24 |
| KRH61738 | Soybean | plasma membrane | 64.57 | 65.39 |
| KRH15833 | Soybean | plasma membrane | 63.82 | 64.63 |
| KRH05190 | Soybean | plasma membrane | 63.32 | 64.12 |
| GSMUA_Achr3P19860_001 | Banana | plasma membrane | 63.82 | 63.66 |
| CDY23320 | Canola | plasma membrane | 65.58 | 59.05 |
| Bra040066.1-P | Field mustard | plasma membrane | 65.33 | 58.96 |
| GSMUA_Achr6P02900_001 | Banana | plasma membrane | 64.32 | 58.18 |
| VIT_11s0118g00270.t01 | Wine grape | extracellular | 10.3 | 57.75 |
| PGSC0003DMT400062155 | Potato | plasma membrane | 49.75 | 50.64 |
| KXG20650 | Sorghum | plasma membrane | 25.38 | 22.1 |
Protein Annotations
| EnsemblPlants:EES12961 | EnsemblPlantsGene:SORBI_3006G239300 | EntrezGene:8068479 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:EamA_dom | PANTHER:PTHR23051 | PANTHER:PTHR23051:SF7 | PFAM:PF00892 |
| ProteinID:EES12961 | ProteinID:EES12961.1 | RefSeq:XP_002448633.1 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| unigene:Sbi.20366 | UniParc:UPI0001A873D7 | UniProt:C5Y917 | MapMan:24.2.1.7 | : | : |
Description
hypothetical protein
Coordinates
chr6:-:57990555..57994242
Molecular Weight (calculated)
43192.2 Da
IEP (calculated)
7.944
GRAVY (calculated)
0.554
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGLKYRAG LCLIVAVVLI WVLSAEVTQG IFTKYKHPFA ITYLGASLMV IYLPLSFLKD FIYNSMRRHS GNTSALKIAS KSSFGGSAPL KNGEFQKVLE
101: MESQKTIVIN CTDVSIPVVE ETKPLIYGIT EMNDGAFKDK QLSTKEIATY GLYLCPLWFV TEYLSNAALA RTSVASTTVL SSTSGLFTLF IGVLLGQDSI
201: NAAKVIAVFI SMAGVVMTTM GQTWASDESE VGKSGATQRT LLGDMFGLMS AIAYGLFTVL LKKFCGEEGE KVDVQKLFGY LGLFTLVALW WIVWPLTALG
301: IEPKFSMPHS AKVDEVVVAN SLIGSVLSDY FWALSVVWTT PLVATLGMSL TIPLAMVADM IIHGRHYSAV YILGSVQVFS GFVIANLADR FSRSLGLL
101: MESQKTIVIN CTDVSIPVVE ETKPLIYGIT EMNDGAFKDK QLSTKEIATY GLYLCPLWFV TEYLSNAALA RTSVASTTVL SSTSGLFTLF IGVLLGQDSI
201: NAAKVIAVFI SMAGVVMTTM GQTWASDESE VGKSGATQRT LLGDMFGLMS AIAYGLFTVL LKKFCGEEGE KVDVQKLFGY LGLFTLVALW WIVWPLTALG
301: IEPKFSMPHS AKVDEVVVAN SLIGSVLSDY FWALSVVWTT PLVATLGMSL TIPLAMVADM IIHGRHYSAV YILGSVQVFS GFVIANLADR FSRSLGLL
001: MGWRYKAGLF LIGTVVIIWV TSAEVTQDIF TAYKQPFAVT YLGASLMIVY LPVAFLKDWL CRYLDRRSSK SNKIPALTDD SSVELGSPLR HKIIEMGLQG
101: TITKKDSEEH LSSHEEEDER PLIGKVREEV QTLKQRKEIT TKQIAMYGLY LAPIWFVTEY LSNAALARTS VASTTVLSST SGLFTLFIGV FLGQDTLNLS
201: KVVAVFVSMA GVVMTTLGKT WASDESQLNS SLNGERSLMG DLFGLLSAVS YGLFTVLLKK FAGEEGEGVD VQKLFGYIGL FTLVALWWLV WPLTALGIEP
301: KFTIPHSVKV DEVVLANGFI GSVLSDYFWA LSVVWTTPLV ATLGMSLTIP LAMVADMMIH GRHYSAIYIL GSTQVFAGFV IANISDLFSK KLGL
101: TITKKDSEEH LSSHEEEDER PLIGKVREEV QTLKQRKEIT TKQIAMYGLY LAPIWFVTEY LSNAALARTS VASTTVLSST SGLFTLFIGV FLGQDTLNLS
201: KVVAVFVSMA GVVMTTLGKT WASDESQLNS SLNGERSLMG DLFGLLSAVS YGLFTVLLKK FAGEEGEGVD VQKLFGYIGL FTLVALWWLV WPLTALGIEP
301: KFTIPHSVKV DEVVLANGFI GSVLSDYFWA LSVVWTTPLV ATLGMSLTIP LAMVADMMIH GRHYSAIYIL GSTQVFAGFV IANISDLFSK KLGL
Arabidopsis Description
AT4g32140/F10N7_50 [Source:UniProtKB/TrEMBL;Acc:O49378]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.